Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1946 ATGCTCGTAGAAGCTTTATTGATCATAGCTGCACTTGTCGCGTATAAAGCTGTCAGCTTCATCTCTCTTCCACTACATCACAGCCATCCTGTTCCGCACGAAAATTCTAAAGATAATGCTGTTCCTATTTCAGAGGATATTTCTTCCTCATCTTTTACTACTACTGATGCTTCTCCTTTGACGACCAAATCCTCTCGGCTGAAAAGTAGGCTTCAACGCAAAAAGATTCTTCTTGTGCTTGATCATGTGGACAGTTTGATGGAAGTTGAAGAATTAATCAAACTATGTGATTGGTTTGGACAAGGAAGTAGAATAATTTTCACATCAAGAGATAGGAAAGTGCTCGAGAATGCTACACCATATGATGGATCTTACGAAACATATCATGTTAAGGAAATGGAATTCCAGGACGCCCTTCATCTCTTCAGTTCAAAGGCCTTTAGGCAAGACGTGCCACTTAAAAGCTACTTGAAGTTATCAAAATGTGTAGTGAGTTATTGTCAAGGAAGTCCATGGGCTCTTATAGTTTTGGGTTGCTTTCTTTTTAAAAGAAGGGAACAAGAATGGGAAAGTGCTTTAGAAAAACTAAATGGAGATGCTCCACAGCAACGAGGCATTTTTAATGTTTTAAAAATGAGTTTTGATGGACTTGATGAGAAACAAAAGAATATATTTCTTGACTTGGCGTGCTTTTTCATAGAACAACATAAGCTTCCTATGGATCAAATAGGACACTACTTTGACTACGCAAATATTGAGATACGTGTTCTTATAGAGAGATCCCTCATTTCAGTTGGTCCAGCCCAAAACTATAAACTTTCCTGGTTGCCAAAAGCTGAGGCGCATCAACCTCGGTTGGAATGTTCATCGGAGGAGGTTAGTGATTGCATGTATCGAGGATTTATTTTGGCCCTTTGGGATGTGGAAGAGTTCAGAAGGTAA 942 0.3917 MLVEALLIIAALVAYKAVSFISLPLHHSHPVPHENSKDNAVPISEDISSSSFTTTDASPLTTKSSRLKSRLQRKKILLVLDHVDSLMEVEELIKLCDWFGQGSRIIFTSRDRKVLENATPYDGSYETYHVKEMEFQDALHLFSSKAFRQDVPLKSYLKLSKCVVSYCQGSPWALIVLGCFLFKRREQEWESALEKLNGDAPQQRGIFNVLKMSFDGLDEKQKNIFLDLACFFIEQHKLPMDQIGHYFDYANIEIRVLIERSLISVGPAQNYKLSWLPKAEAHQPRLECSSEEVSDCMYRGFILALWDVEEFRR 313
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1946 313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 228 IPR027417 -
Dere13g1946 313 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 64 266 IPR044974 GO:0006952
Dere13g1946 313 Gene3D - 29 120 IPR027417 -
Dere13g1946 313 Pfam NB-ARC domain 62 200 IPR002182 GO:0043531
Dere13g1946 313 Gene3D - 133 218 IPR042197 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere13g1946 Dere-ChrDere13 26489317 26492108 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1946 57 265 WRKY Transcription Factor Family AT5G45050 37.089 2.08e-26 107