Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1944 ATGGAAGCTACTGTTAATGGTGAAAATGGAGGGAGAATGGTGGTGGAGAGAAATGATGCAGAGAAAGAGAGCGAGGAAGTTCATCTAAAGAAGATGATTGCAAGCCATCCTTTGTATGGCATATTGATTGAGTCTCACTTCAACTGTTTGAAGGTGGGGTTAGGTGAAAATGCGGAATTTGACATCGAAAAAGATGCAGGGAAGCAGTTAGCCAATTCCAAGGCCAAAGCTCATACTGATCCTCCCAGCTCTTCAGAGCTTGATCATTTCATGGAAGCATATTGCAGAGCACTGAGCAAGCTCAAAGAAGCCATAGAGGAACCAACAAGAGAAACAAAGGCTTTCATCAATGGAATGTATATAGAACTGAAGGATCTCACTCACAACAATAACATTGAACCAAATAACCCGCAAGAGCCCTAG 423 0.4255 MEATVNGENGGRMVVERNDAEKESEEVHLKKMIASHPLYGILIESHFNCLKVGLGENAEFDIEKDAGKQLANSKAKAHTDPPSSSELDHFMEAYCRALSKLKEAIEEPTRETKAFINGMYIELKDLTHNNNIEPNNPQEP 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1944 140 SMART KNOX1_2 27 70 IPR005540 GO:0003677|GO:0005634
Dere13g1944 140 Pfam KNOX1 domain 29 53 IPR005540 GO:0003677|GO:0005634
Dere13g1944 140 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 1 131 - -
Dere13g1944 140 SMART KNOX2_2 73 128 IPR005541 GO:0003677|GO:0005634
Dere13g1944 140 Pfam KNOX2 domain 85 127 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1944 Dere-ChrDere13 26475612 26476792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1944 29 137 Homeobox Transcription Factor Family AT4G08150 31.304 3.22e-10 55.1