Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1905 ATGCCAATATTCTCTCGCTTCCCTTCTCTTCTTCTTCTTCTTCTTCTCGTGCTCTCTGCCTTCACAACCCCATCATCATCTTCTTCCTCCTCTGAGACGTCTTTCGTCTTCGGCGGCTGCTCACAGGTGAAGTTCACGCCGGGCTCCACCTACGAGTCCAGCGTCAACTCCCTCCTCACATCCCTCGTCAACGCGGCCATGTTCACCACCTACAACGACTTCACCATCCCTCCGTCCTCCCCACAGGACACCCCTCTCTACGGCCTCTTCCAGTGCCGCGGCGACCTTGCCTCCGCCGACTGCTCGCGCTGCGTCGCCCGGGCCGTTTCGCAGCTCGGCACCCTCTGCCTTGACTCCTGCGGCGGCGCCCTGCAGCTCGACGGTTGCTTCATCAAGTATGATAATTCCACGTTCTTAGGCGCGGAGGACAAGACTTTGGTCTTGAAGAAATGTGGGCCGTCGATTGGATTCACTTCCGATGCGTTGACTAGTAGGGATGCTGTGCTGGCGTATTTGCAGACGTCGGATGGAACAGATAAGACGTTTAGAGCGACGAGCTCTGGGGATGTACAGGGTGTGGCGCAGTGCGTGGGGGATTTGAGTGCGACCGAGTGCAAGGATTGTCTATTGAGTGCGATCGGACGGCTGAGAACCGAGTGTGGGCCTGCCCAGTGGGGACAGGTTTACTTGGCCAAGTGCTACGCTCGCTACTCGGAAGGTGGGGATTACTCGCGCGGCCATAACGATCATGACAACAAAAATGATGATAAGCTTCAGAAGACACTGGCAATAATAGTTGGACTCATAGCTGGAGTGGCTTTACTCATCATATTCATTTCATTCTTGACCAAATTGTGCAAAAAGGAAAAAGGTGGAAAATAA 882 0.5442 MPIFSRFPSLLLLLLLVLSAFTTPSSSSSSSETSFVFGGCSQVKFTPGSTYESSVNSLLTSLVNAAMFTTYNDFTIPPSSPQDTPLYGLFQCRGDLASADCSRCVARAVSQLGTLCLDSCGGALQLDGCFIKYDNSTFLGAEDKTLVLKKCGPSIGFTSDALTSRDAVLAYLQTSDGTDKTFRATSSGDVQGVAQCVGDLSATECKDCLLSAIGRLRTECGPAQWGQVYLAKCYARYSEGGDYSRGHNDHDNKNDDKLQKTLAIIVGLIAGVALLIIFISFLTKLCKKEKGGK 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1905 293 FunFam cysteine-rich repeat secretory protein 3 32 138 - -
Dere13g1905 293 ProSiteProfiles Gnk2-homologous domain profile. 143 242 IPR002902 -
Dere13g1905 293 FunFam Cysteine-rich repeat secretory protein 60 159 240 - -
Dere13g1905 293 Pfam Salt stress response/antifungal 166 238 IPR002902 -
Dere13g1905 293 Pfam Salt stress response/antifungal 40 135 IPR002902 -
Dere13g1905 293 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 6 286 - -
Dere13g1905 293 Gene3D - 31 138 IPR038408 -
Dere13g1905 293 Gene3D - 158 240 IPR038408 -
Dere13g1905 293 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1905 Dere-ChrDere13 25960143 25962674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1905 5 238 Pollen Coat Proteome AT4G20670 25.292 1.01e-14 70.9