Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1889 ATGTTAACCTCCACCGTTGATATTGGGACAGAGTGGAAGCTGACCGTTGATTCACATGTCGAAGCACTAGCCGCAAAACTGAGAGCAAAAGGAGTTCAATGCCGTTTTGCGTGCCGGGCAAATGGGTGGAGGAAAGTGGGTGGCATTAACCCTGCTCCAAAACGCCAATCCCCAAGTACGAACCCAATCGACTCCAATACAGAACCAACCATGAGAACCCAACGCCTTCTTCTGCTCATCCTCTCCTCGTCCACATTCTTCTTCCTCCACCCAACCTCCACCGCCGGAGACGCCTACGCCAACGCCCCCGCCGCTGATTCTCCTGACGGCGCCGATTTCATCCGCACAAGCTGCGGCACCACCCTCTACCCTGACGTCTGCTACTCCTCCCTCTCTCGCTACGCCAATGCCGTCCAGCAGAACCCCGGCCAACTCGCTCGCCTCGCTATCGCCGTGAGCCTCTCCAAGGCTCATCGAATGGCCTCGTACATCTCCAACCTCACTCGCGGCGCCGACTACGGCGCGAACTCTCGCGCCGCCTCCGCCCTCCACGACTGCTTCACGAACCTCGACGATGCCGTGGATGAAATCCGCGGCTCGCTGAAGCAGATGCGGCAGATTGGAGCCGCCGGAACTAGCGAGGAGTCGTTCAGGTTCCAGATGAGCAACGTGCAGACGTGGATGAGCGCGGCTCTGACGGACGAGGAGACGTGTACGGACGGCTTCGAGGACGTACCGGACGGTTCCGTGAAGACGGATGTATGCGACCAGGTCACGAACTTGAAGAAGTTCACCAGTAATGCCTTAGCGCTGGTAAATAGTTACGCTAACAAGGGAATGCCTTAA 846 0.5792 MLTSTVDIGTEWKLTVDSHVEALAAKLRAKGVQCRFACRANGWRKVGGINPAPKRQSPSTNPIDSNTEPTMRTQRLLLLILSSSTFFFLHPTSTAGDAYANAPAADSPDGADFIRTSCGTTLYPDVCYSSLSRYANAVQQNPGQLARLAIAVSLSKAHRMASYISNLTRGADYGANSRAASALHDCFTNLDDAVDEIRGSLKQMRQIGAAGTSEESFRFQMSNVQTWMSAALTDEETCTDGFEDVPDGSVKTDVCDQVTNLKKFTSNALALVNSYANKGMP 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1889 281 MobiDBLite consensus disorder prediction 53 68 - -
Dere13g1889 281 NCBIfam pectinesterase inhibitor domain 98 275 IPR006501 GO:0004857
Dere13g1889 281 MobiDBLite consensus disorder prediction 47 68 - -
Dere13g1889 281 Pfam Plant invertase/pectin methylesterase inhibitor 112 271 IPR006501 GO:0004857
Dere13g1889 281 Gene3D Invertase/pectin methylesterase inhibitor family protein 110 275 IPR035513 -
Dere13g1889 281 PANTHER PECTINESTERASE INHIBITOR-LIKE 77 271 - -
Dere13g1889 281 FunFam Pectin methylesterase inhibitor 1 109 275 - -
Dere13g1889 281 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 112 275 IPR035513 -
Dere13g1889 281 SMART PMEI_2 109 271 IPR006501 GO:0004857
Dere13g1889 281 CDD PMEI-like_3 116 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1889 Dere-ChrDere13 25804039 25806108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1889 94 274 Carbohydrate Esterase AT3G14310 24.176 7.07e-16 75.5