Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1882 ATGGAAGGTGCTTTGAGCAGAGAGGAACACAAAGATGAAGACTGGGAGAGATTAGCTGCTCAAGATCGTAAGGGGATGTTAGAGAATGGAAAAGAGATAGCAGTGAAGAAGTTAGCAAAGAAGTCAGAAAAAGGAATGAAAGAATTCCTAAAAGAGGTAAAATTGTTGACCAAACTGAAGCACCCCAATGTGGCGAGATTGGTTGGTTATGCCGTTGCTCGTGATTGTGAACCTTTGCTTGTTTACAAGTATATTCCGAGCACAAGTCTTGAGAAGCGATTTTCTTTATTCAGCGATGAAGCTACAGGTCTTGAATGCAGAGAGCAGATTAATTGGACAAGAAGGTATAAAATAATCAAAGGCATAGCAAAAGCTTTGAATTATCTTCATGTTGGCTCCCAAAACCGCATTATCATCCACCGTAACATAAATCCCAGCAATATCTTGCTCGATCACAAATGGAGGCCAATGATTGGTGGCTTTAGGCGAGCCCACCAATTAGATGAAGATCAAACCCATGTCTATTCGCATGTAGTCGGGACTGATCGGTATGGATTTGCATTTAAAGCTCATAAACTTTACGAGGAAAACAGGATCCTAGAAATCATGGACACTACTTTAGCCGATTCTGCAGTAATTGAGCAAGTGACGAACTGCATCATAATAAGTTTACTGTGCGTTCAAGGTAATCCAAAGACACGTCCCGACATGAATCATGTGGTGTCCGTGATAATAGGGAATCAGAGCATTATGGGAATGTCAGTTGGCAAACCAGGACTGTCAGGTTATGACAAATCTGATCTCATTGATTCTGCTGTTAGTTCGCAACAACCTCAGTTGCTCCAAAATGCTCATCAAGAAGGATACAAAGATGAAAATTTGAACAAAAAATTAGATACCCAGAATTGTCAGAAGTTTTCTTATGAAACCTTATACTATGCTACCAACAAATTTGCTTCTCAAAATGTGCTAGGTCAAGGGGGCTTCGGAGTCGTCTATAAGGGGAAGTTGGATGATGGAAGAGAGATTACAGTGAAGAAGTCATCAAAGTTAACTAAAGAAAAGAGGAATACACTTATAAAGGAGGTAGAGTTGTTGAGTAGCGTGAAGGACCCCAATGTGGTAAAATTATTTGGTTATTGCGTTGATGACAATAAATGTTTACTTGTTTACGAGTATGTTCCTAATCAGAGTCTTGACAAGCATTTATTTGGTGCCAAGGGGAGAAAGCAAGAGCTTGATTGGATAAGGACATATGGCATAATTGTAGGCGTGGCAAAAGGTTTAAGTAATCTTCATGCTAACCCCCAAAACTGTATCATCCACCGTGACATAAAGGCTGGCAATATCTTGCTTGATCATAAATGGGTGCCAAAAATTGGTGACTTCGGTATTAGCCGTCTATTTGACCTAGATCAAACGCATGTCTCTACTGATCCAGTTGGGACTTGGGGATATATCGCACCTGAGTATTTGGAACTCAGATATTTGTCAACCATGACAGATGTATATAGTTTTGGAGTTTTGGTACTGGAGATTATTAGTGGGAAGAAATACTATTTTAAGCCTCCACCGCCACAAGACAGTGCAGTATGCTTGCTTGATTGGGCATATGAACTATTTAAGGTAGGCAAAACCTTGGAGATCATGGATCCTGCTCTAGCAATTTCAGCAATCACTAAGCAAGTGAAAAAGTGCATTAAAATAGGTCTATTATGCGTTCAAGGTGACCCGAAGTCACGTCCTAATATGGAACATGTGTTGTCTATGTTGACGTTGAATTTAGTCCCCAAGGAAATATCAATTGGCAAACCAGGAATCCTTGGTTTTCGAGATCGCTCAGGTTCTGATGAAGATCAAGAAGAGACTTCAAAGACAAGTAGGAGGCGCAGGAAAAGAATTCTTGTACTATAA 1914 0.4018 MEGALSREEHKDEDWERLAAQDRKGMLENGKEIAVKKLAKKSEKGMKEFLKEVKLLTKLKHPNVARLVGYAVARDCEPLLVYKYIPSTSLEKRFSLFSDEATGLECREQINWTRRYKIIKGIAKALNYLHVGSQNRIIIHRNINPSNILLDHKWRPMIGGFRRAHQLDEDQTHVYSHVVGTDRYGFAFKAHKLYEENRILEIMDTTLADSAVIEQVTNCIIISLLCVQGNPKTRPDMNHVVSVIIGNQSIMGMSVGKPGLSGYDKSDLIDSAVSSQQPQLLQNAHQEGYKDENLNKKLDTQNCQKFSYETLYYATNKFASQNVLGQGGFGVVYKGKLDDGREITVKKSSKLTKEKRNTLIKEVELLSSVKDPNVVKLFGYCVDDNKCLLVYEYVPNQSLDKHLFGAKGRKQELDWIRTYGIIVGVAKGLSNLHANPQNCIIHRDIKAGNILLDHKWVPKIGDFGISRLFDLDQTHVSTDPVGTWGYIAPEYLELRYLSTMTDVYSFGVLVLEIISGKKYYFKPPPPQDSAVCLLDWAYELFKVGKTLEIMDPALAISAITKQVKKCIKIGLLCVQGDPKSRPNMEHVLSMLTLNLVPKEISIGKPGILGFRDRSGSDEDQEETSKTSRRRRKRILVL 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1882 637 Gene3D Phosphorylase Kinase; domain 1 289 393 - -
Dere13g1882 637 SMART serkin_6 318 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1882 637 Gene3D Transferase(Phosphotransferase) domain 1 97 185 - -
Dere13g1882 637 Gene3D Transferase(Phosphotransferase) domain 1 394 599 - -
Dere13g1882 637 SUPERFAMILY Protein kinase-like (PK-like) 27 244 IPR011009 -
Dere13g1882 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Dere13g1882 637 ProSiteProfiles Protein kinase domain profile. 1 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1882 637 SUPERFAMILY Protein kinase-like (PK-like) 300 593 IPR011009 -
Dere13g1882 637 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 292 393 - -
Dere13g1882 637 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 190 258 - -
Dere13g1882 637 FunFam cysteine-rich receptor-like protein kinase 10 394 597 - -
Dere13g1882 637 MobiDBLite consensus disorder prediction 607 630 - -
Dere13g1882 637 Gene3D Phosphorylase Kinase; domain 1 23 85 - -
Dere13g1882 637 ProSiteProfiles Protein kinase domain profile. 318 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1882 637 ProSitePatterns Protein kinases ATP-binding region signature. 324 347 IPR017441 GO:0005524
Dere13g1882 637 MobiDBLite consensus disorder prediction 611 628 - -
Dere13g1882 637 Pfam Protein kinase domain 28 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1882 637 Pfam Protein kinase domain 320 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1882 Dere-ChrDere13 25707102 25712287 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1882 297 628 Receptor kinase-like Gene Family AT4G11530 42.773 4.59e-77 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere13g1882 Pkinase 5.1e-46 CL0016