Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1881 ATGTTGAAGAATCCCTTGAGCAACGTCCCGAGAGGAATAGAAGATGCTTTTGGCAGAAAGGAACACGAAGATGAAAACTGGGAGAGATTAGCTGCTCAAGATCCTAACATCTTTCCTTATGAAACCATAGTTGTTGCTGCCAACTATTTTTCTCCTCAAAACAGGCTGGGATCTGACTCCGTCTACAAGGCAAGATGTTCATCCAATTTTTCCCTTTGTTCATTTTTTGGCGTCTTAGAGGATGGGAGAGAAATTGCAGTGAAGAAGTTAGCAAAGAAGTCAGAAAAGGAAATGAAAGAATTCATAAGGCAGGTAAGGTTGTTGGCTACACTGAAGCACCCCAATGTGGTGGAATTGGTCGGTTATGCCGTTGCTCGTGACCATGAACCTTTGCTTGTTTACAATTATACTGGGAGTATAAGTCTTGAGTCGGTTTTTAAACTCGAGAGGTTTGAGCAGATACATTGGCCAGAAAGGTATAAAGTAATCGAAGGCATAGCAAAAGGTTTGAATTATCTTCATGGTGGCTCGCAAAACCGCATCATCATCCACGGTAACTTAAAACCCAGCAATATCTTGATTGATCTCATATGGAGGCCCATTATTGTTGGCTTTAGCCGAGCCCACCAATTAGATGAAGATCAAACCCGTGTCCATACGCATCGAGTTGAGACTCAGGATAGGTTGAAGATAGGGTATCAGAAACGTAGATGTCTCTCAAAAAAGACTGACATATATAGATTTGGAGTTTTGATGTTGAAGCTTATCAGTGACCAAATATACAGAAGATATCAAAAGGTCGAATCTGCAATAGACCTCCTTGATTGGCAAGCACACAAACTTTATCAGAAGATAAGTTCAGAAATCATGGACCCTACTTTTTCAAATTCTGCAATGACTGGGCAAGTGAAAAACTGCATCAAAATAGGTTTACTATGCGTTCAAGTTGATCCAAGGACACGTCCCGACATGAATCTTGTTGTGTCCATGTTAACAGAGAATCATGGAATTAAAGCAATGCCAATTGGCAAACCAGGAATGTTAGGATACAACAAATCTGACATCATTGATTCTGATGTCAGTTCGCAACAACCTCAGCTACTCCAAGATGCTTATCAAGCATCTGGGGATGAAATACAAAATCAAGGTGAATTTGAAGTTGTGGATGAGCATCAAGTCCAAGAGAGTCCTTCAAATTCAAAGCAAGTCAAGAAAGAAGACGAAGACTCACACAAAGGACACAAAGCTAAAATTCTGAAGAAAAAAATAGCTGCCCAGAATTGTCAGAAGTTTTCCCATGAAACCCTAAGTCATGCTACTAATAAATTTGCTTCTCAGAATGTCCTCGGTGAAGGGGGCTTCGGAGTCGTCTATAAGGGGACTTTGGTTGATGGTAGAGAGATTGCAGTGAAGAAGTCATCAAAGATAACTGAAGAAAAGAGGAATACACTTATACAGGAAATAGAGTTGTTGAGTAGCGTGAAGCACCCCAATGTGGTAAAATTGTTTGGTTATTGCGCTGATGACAATGAATGTTCACTTGTTTATGAGTATGTTCCCAATCAGAGTCTTGACAAGCATTTATTCGGTCCCAATGGGAGAAAGCAAGAACTTGATTGGACACGGACGTACAACATAATTATAGGCATCGCAAAAGGTTTAAATTATCTTCATGCTGACCCACAAAACTGCATCGTCCACCGTGACATAAAAGCTAACAATATTTTGGTTGATCATAAATGGGTGCCAAAAATTGGTGACTTTGGTATTAGTCGTCTATTCGATGTGGATCGAACTCATGTCTCTACTGACCCACTTGGGACTTGGGGATATGTCGCTCCAGAACATTTGGAACTTAGGCATATGTCAAAAATGACAGACGTATACAGCTTTGGCGTTTTGGTATTGGAGCTTGTCAGCGGAAAAAGATACAATTTTGTGCCGCCCCCTCCACAGAACAATATAATAGGTCTACTTGATTGGACATACGAACTTTTTAAGATGGGCAAGATTTTAAAGATCATGGACCCTGCATTAGCGATTTCAGCTGTCACTTTGCAAGTGGAAACCTGTATTAAAGTTGGCTTACTATGCGTTCAAGGTGACCCAAAGTTACGTTTTGACATGGAGTGGGTTTTGTCCACGTTAACATTGAATCAACTCCCTAAAGAAATATCAATTGGCAAACCAGGAATCCTTGGTTTTAGAGATCGCTCAAGTAGCTCTTCGGATCCTGATGATGATCAAGAAGAGTTTGTAGACTTCAGCGACAATCTGGTGGAGGAGGAAAAGGAGAATTGTTGTACTATAATTTTGTAG 2319 0.4049 MLKNPLSNVPRGIEDAFGRKEHEDENWERLAAQDPNIFPYETIVVAANYFSPQNRLGSDSVYKARCSSNFSLCSFFGVLEDGREIAVKKLAKKSEKEMKEFIRQVRLLATLKHPNVVELVGYAVARDHEPLLVYNYTGSISLESVFKLERFEQIHWPERYKVIEGIAKGLNYLHGGSQNRIIIHGNLKPSNILIDLIWRPIIVGFSRAHQLDEDQTRVHTHRVETQDRLKIGYQKRRCLSKKTDIYRFGVLMLKLISDQIYRRYQKVESAIDLLDWQAHKLYQKISSEIMDPTFSNSAMTGQVKNCIKIGLLCVQVDPRTRPDMNLVVSMLTENHGIKAMPIGKPGMLGYNKSDIIDSDVSSQQPQLLQDAYQASGDEIQNQGEFEVVDEHQVQESPSNSKQVKKEDEDSHKGHKAKILKKKIAAQNCQKFSHETLSHATNKFASQNVLGEGGFGVVYKGTLVDGREIAVKKSSKITEEKRNTLIQEIELLSSVKHPNVVKLFGYCADDNECSLVYEYVPNQSLDKHLFGPNGRKQELDWTRTYNIIIGIAKGLNYLHADPQNCIVHRDIKANNILVDHKWVPKIGDFGISRLFDVDRTHVSTDPLGTWGYVAPEHLELRHMSKMTDVYSFGVLVLELVSGKRYNFVPPPPQNNIIGLLDWTYELFKMGKILKIMDPALAISAVTLQVETCIKVGLLCVQGDPKLRFDMEWVLSTLTLNQLPKEISIGKPGILGFRDRSSSSSDPDDDQEEFVDFSDNLVEEEKENCCTIIL 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1881 772 MobiDBLite consensus disorder prediction 390 413 - -
Dere13g1881 772 Pfam Protein kinase domain 445 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1881 772 Pfam Protein kinase domain 80 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1881 772 FunFam cysteine-rich receptor-like protein kinase 10 519 722 - -
Dere13g1881 772 SMART serkin_6 443 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1881 772 Gene3D Transferase(Phosphotransferase) domain 1 519 726 - -
Dere13g1881 772 ProSiteProfiles Protein kinase domain profile. 50 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1881 772 ProSiteProfiles Protein kinase domain profile. 443 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1881 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 565 577 IPR008271 GO:0004672|GO:0006468
Dere13g1881 772 Gene3D Transferase(Phosphotransferase) domain 1 140 345 - -
Dere13g1881 772 Gene3D Phosphorylase Kinase; domain 1 402 518 - -
Dere13g1881 772 SUPERFAMILY Protein kinase-like (PK-like) 26 333 IPR011009 -
Dere13g1881 772 SUPERFAMILY Protein kinase-like (PK-like) 424 719 IPR011009 -
Dere13g1881 772 ProSitePatterns Protein kinases ATP-binding region signature. 449 472 IPR017441 GO:0005524
Dere13g1881 772 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 415 518 - -
Dere13g1881 772 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 411 736 - -
Dere13g1881 772 Gene3D Phosphorylase Kinase; domain 1 24 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1881 Dere-ChrDere13 25686780 25692537 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1881 422 717 Receptor kinase-like Gene Family AT4G11530 43.189 4.78e-72 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere13g1881 Pkinase 3.1e-48 CL0016