Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1880 ATGAACCCATCTTTAGTAGATTCTGCAGTAACTGAGCAAGTGACAAACTGCATCATAATAGGTTTATTATGCGTTCAAGGCAACCCAAAGAGACGTCCGGACATGGATCATGTTGTGTCCATGTTAACAGAGAACCAGGGAATGATGGGAGTGCGAATTGGCAGACCAGGATTGTTAGGATTCGACAAATCTGACCTCATTGACTCTGATGTGATGGGGACTTCAAAAGTCGTCTATAAGGGGACTTTGGATGATGGGAGAGAGATTGTAGAGAAGAAGTCATCAAAGATAGATGAAGATATGAGGAATACACTTATAATGGAAGTTGAATTTCTGAGTAGCGTGAAGCACCCCAATGTGGTAAAATTGTTTGGTTATTACGTTGATGACACTGAATTTTTAATTGTATACGAGCACATTCCCAATCAAAGTCTTGAAAACCATTTTTCGTTGTCTATTCGATGTGATACAAAACTAAATGCTTGTGAAGCATATGCAGGGGATATATTGCTTCAGAGCACTGGTGTGGAGACCACACGTGAACTTTTCAAGATAAGCAAGACCTTAGAGAACATAGACCTTGTATTAGCAATTTCAGCATCCACTGAGCAAGTGGAAAATTGCATTATAACAGGCTTACTATGCATCCAATGTGACCTAAAATTACGTCCTAACATGGAGCAAGTTTTGTCCATGTTAACATTGAATCAAGTCCCTAGGGAAAAATCAATTGGCAGACCAAGAATCCCTAGTTTTAGAGATAGTCCAGGTCCTGATCATGTTCAAGAAGAGTTTATACTTTGTAGACTTCAAAGACAATCAGGTGGAGCAGGAAAAGGAGAATTCTTGTACTATAGTCTTGTAGCCTTCAAGGCCAATTTGCACTTGGTGATTCAGGGTCAAGTAGAAATTCTTACACATTTGCTTCATTTAATTACCATCGTTAAGTCCAATTGCATTATACTCAATATCAGAAAGATAATAAGTAAATTGTTGTAG 999 0.3854 MNPSLVDSAVTEQVTNCIIIGLLCVQGNPKRRPDMDHVVSMLTENQGMMGVRIGRPGLLGFDKSDLIDSDVMGTSKVVYKGTLDDGREIVEKKSSKIDEDMRNTLIMEVEFLSSVKHPNVVKLFGYYVDDTEFLIVYEHIPNQSLENHFSLSIRCDTKLNACEAYAGDILLQSTGVETTRELFKISKTLENIDLVLAISASTEQVENCIITGLLCIQCDLKLRPNMEQVLSMLTLNQVPREKSIGRPRIPSFRDSPGPDHVQEEFILCRLQRQSGGAGKGEFLYYSLVAFKANLHLVIQGQVEILTHLLHLITIVKSNCIILNIRKIISKLL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1880 332 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 77 150 - -
Dere13g1880 332 Pfam Protein kinase domain 73 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1880 332 Gene3D Phosphorylase Kinase; domain 1 59 139 - -
Dere13g1880 332 SUPERFAMILY Protein kinase-like (PK-like) 73 149 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1880 Dere-ChrDere13 25672096 25675158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1880 60 157 Receptor kinase-like Gene Family AT3G58690 33.673 3.27e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Dere13g1880 Pkinase 9.7e-10 CL0016