Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1876 ATGCCGAAGAATACCTTGAGCAACATCCCCACAGGAATGGAAGGTGCTTTGAGCAGAGAGGAACATAAAAATGAAGACTGGGAGAGACTAGCTGCCCAAGATCGTGAGGTCCTTCCTTATCAAAACATAGTTGTTGCTGCCAACTATTTTCGTCCTCAAAATAAGCTTGGTGTAGGAGACTTTGGTATGTTAGAGGATGGGAGAGAGATTGCAGTGAAAAAGTTAGCAAAGAAGTCAGAAAAAGGTATGAAAGAATTCGTAAGAGATGTAAGATTGTTGAGCAGACTGAAGCACCCCAATGTGGTGAGATTGGTTGGTTATGCAGTTGCTCGTGACTGTGAACCTTTGCTTGTTTACAAGTATGTTCCGAGTGCGATAGATCTTGGGAAGCAGTTTCGATCAATCAGGAGAGAGCAGATTAATTGGACACATAGATTTGAAATAATCAAAGGCATTGCAAAAGGTTTGAATTATCTTCATGGTGGCTCCGGAAACCGCATCATCATCCACCGTAACATAATCCCGTCCAATATCTTGCTTGATGACAATTGGAGGCCAATGATTGGTGGCTTTAGCCGAGCCTACATATTAGATGAACATCAAACCCATGTCAATACTCATGCACACAGATATTATCTGGAAAAAAGAAGTTTAGAAATCATGGACTATTCTTTACAAGATTCTGCAGTGACTGAACAAGTGACAAACTGCATCATAATAGGTTTATTATGCGTTCAAGGCAACCCAAAGTCACGTCCCGGCATGGATCATGTTGTGTCTATGTTAACAGAGAACCAAGATATGATAGGAATGCAAATTGGCAAACCAGGATTGTTAGGATTCGACAAATCTGACCTCATTGACTCTCATGTCAGTTCGCAACAAACTCAGCGATTCCGAGATGCTTATCAAGCATCTGGGGATGAAATACAAAATCAAGGTGAATTTGAAGTTGTGGATAAGTATCAAGTCCAAGAGAGTCCTTCAAATTCAAACCAAGTCAAGAAAGAAGCATCTGGGGATGAAATACAAAATCAAGGTGAATTTGAAGTTGTGGATGAGCATCAAGTCCAAGAGAGTCCTTCAAATTCAAACAAAGTCAAGAAAGAAGACGAAGACTCAGACAAAGGACACAAAGCTAAAAATCTGAAGAAAAAAATAGCTGCCCAGAACTGTCAGAAGTTTTCCCATGAAACCCTAAGTAATGCTACTAATAAATTTGCTTCTCAGAATGTCCTCGGTGAAGGGGGCTTCGGAGTCGTCTATAAGGGGACTTTGGTTGATGGTAGAGAGATTGCAGTGAAGAAGTCATCAAAGATAACTGAAGAAAAGAGGAATACACTTATACAGGAAATAGAGTTGTTGAGTACCGTGAAGCACCCCAATGTGGTAAAATTGTTTGGTTATTGCGCTGATGACAATGAATGTTTACTTGTTTATGAGTATGTTCCCAATCAGAGTCTTGACAAGCATTTATTCGGTCCCAGTGGGAGAAAGCAAGAACTCGATTGGACACGGACGTACAACATAATTATAGGCGTCGCAAAAGGTTTAAATTATCTTCATGCTGACCCACAAAACTGCATCGTCCACCGTGACATAAAGGCTAACAATATTTTGGTTGATCATAAATGGGTGCCAAAAATTGGTGACTTTGGTATTAGTCGTCTATTCGATGTGGATCGAACTCATGCCTCTACTGACCCACTTGGGACTTGGGGATATGTCGCTCCAGAACATTTGGAACTTAGGCATATGTCAAAAATGACAGACGTATACAGTTTTGGCGTTTTGGTATTGGAGCTTGTCAGTGGAAAAAGATACAATTTTGTGCCGCCCCCTCCACAAAACAATATAATAGGTCTACTTGATTGGACGTACAAACATTTTAAGATGGGCAAGATTTTAAAGATCATGGACCCTGCATTAGCGATTTCAGCTGTCACTGTGCAAGTGGAAACCTGCATTAAAGTTGGCTTACTATGCGTTCAAGGTGACCCAAAGTTACGTTTTGACATGGAGTGGGTTTTGTCCACGTTAACATTGAATCAACTCCCTAAAGAAATATCAATTGGCAAACCAGGATTCCTTGGTTTTAGAGATCGCTCAATTAGCTCTTCAGATCCTGATGATGATCAAGAAGAGTTTGTAGACTTCAGCGACAATCTGGTGGAGGAGGAAAAGGAGAATTGTTGTACTATAATTTTGTAG 2211 0.4057 MPKNTLSNIPTGMEGALSREEHKNEDWERLAAQDREVLPYQNIVVAANYFRPQNKLGVGDFGMLEDGREIAVKKLAKKSEKGMKEFVRDVRLLSRLKHPNVVRLVGYAVARDCEPLLVYKYVPSAIDLGKQFRSIRREQINWTHRFEIIKGIAKGLNYLHGGSGNRIIIHRNIIPSNILLDDNWRPMIGGFSRAYILDEHQTHVNTHAHRYYLEKRSLEIMDYSLQDSAVTEQVTNCIIIGLLCVQGNPKSRPGMDHVVSMLTENQDMIGMQIGKPGLLGFDKSDLIDSHVSSQQTQRFRDAYQASGDEIQNQGEFEVVDKYQVQESPSNSNQVKKEASGDEIQNQGEFEVVDEHQVQESPSNSNKVKKEDEDSDKGHKAKNLKKKIAAQNCQKFSHETLSNATNKFASQNVLGEGGFGVVYKGTLVDGREIAVKKSSKITEEKRNTLIQEIELLSTVKHPNVVKLFGYCADDNECLLVYEYVPNQSLDKHLFGPSGRKQELDWTRTYNIIIGVAKGLNYLHADPQNCIVHRDIKANNILVDHKWVPKIGDFGISRLFDVDRTHASTDPLGTWGYVAPEHLELRHMSKMTDVYSFGVLVLELVSGKRYNFVPPPPQNNIIGLLDWTYKHFKMGKILKIMDPALAISAVTVQVETCIKVGLLCVQGDPKLRFDMEWVLSTLTLNQLPKEISIGKPGFLGFRDRSISSSDPDDDQEEFVDFSDNLVEEEKENCCTIIL 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1876 736 Gene3D Transferase(Phosphotransferase) domain 1 129 234 - -
Dere13g1876 736 MobiDBLite consensus disorder prediction 364 380 - -
Dere13g1876 736 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524
Dere13g1876 736 ProSitePatterns Protein kinases ATP-binding region signature. 56 78 IPR017441 GO:0005524
Dere13g1876 736 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 207 311 - -
Dere13g1876 736 SUPERFAMILY Protein kinase-like (PK-like) 388 683 IPR011009 -
Dere13g1876 736 Pfam Protein tyrosine and serine/threonine kinase 57 221 IPR001245 GO:0004672|GO:0006468
Dere13g1876 736 Gene3D Phosphorylase Kinase; domain 1 366 482 - -
Dere13g1876 736 Gene3D Phosphorylase Kinase; domain 1 13 121 - -
Dere13g1876 736 SMART serkin_6 407 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1876 736 Gene3D Transferase(Phosphotransferase) domain 1 483 690 - -
Dere13g1876 736 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 379 482 - -
Dere13g1876 736 MobiDBLite consensus disorder prediction 350 383 - -
Dere13g1876 736 ProSiteProfiles Protein kinase domain profile. 50 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1876 736 SUPERFAMILY Protein kinase-like (PK-like) 37 271 IPR011009 -
Dere13g1876 736 ProSiteProfiles Protein kinase domain profile. 407 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1876 736 FunFam cysteine-rich receptor-like protein kinase 10 483 686 - -
Dere13g1876 736 MobiDBLite consensus disorder prediction 1 22 - -
Dere13g1876 736 Pfam Protein kinase domain 409 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1876 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1876 Dere-ChrDere13 25530800 25536278 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1876 386 718 Receptor kinase-like Gene Family AT4G11530 40.237 5.51e-73 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere13g1876 Pkinase 2.1e-48 CL0016