Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1850 ATGATCCTTCAAATTTCGAATTATAACTATGAGGTTGATGGCCGAGACGACATGCAGATTCCATTACTGGCTACTAGCATTCAGCACAATGTATAAAAGCCTAGAAATCTGAAACTTAGGATCAAAAGAGGTATTGATCTAGCCAAATGCGATTTTGTAACTGACAGTGATCCTTATGTCGTTGTCACCTTGGGCGACCAGGCAGTGTTCGATGAAGACACAATGATGGATGACAAAATGGGGGATGCACATATAGACTTAAAGCCATATCTTCAGTGCCTGAATATGAGCTTCAACAACCGCAAAAATGGCGACATTGTGATGTGGGTTGAGCCTCAAGAGAAAAACTGCCTCGCTGAGAAGAGCAGGTGCATATGGAACGGCGGGAAAATAAGCCAAGAAATGAAACTCAAGTTGAGAAATATAAAGCGCGGCTACGTCGTCGTGGAAATAAGCAACAAGTGA 465 0.4258 MILQISNYNYEVDGRDDMQIPLLATSIQHNVXKPRNLKLRIKRGIDLAKCDFVTDSDPYVVVTLGDQAVFDEDTMMDDKMGDAHIDLKPYLQCLNMSFNNRKNGDIVMWVEPQEKNCLAEKSRCIWNGGKISQEMKLKLRNIKRGYVVVEISNK 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1850 154 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 36 111 IPR035892 -
Dere13g1850 154 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 69 151 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1850 Dere-ChrDere13 25141820 25144266 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1850 68 147 C2H2 Transcription Factor Family AT1G70790 45.783 7.92e-17 70.9