Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1849 ATGGAGAAGACATGGCAAACGAGAAAGAGAAAGAGGAGAATGCGAGAGCTTTTCTCTGTCAGAATCAAGGGCAAAGATATCACCGAGCTCATCGCTGCTGGAAGGGAGAGGTTGGTTTCAGTGCCTGGTGGTAGGGGTACGGTTGCTGTTACTGCAGCTCCTGCGGGAGGTGCTCTTGCTGGTGGTGCTACACCTGCTGCCAAGGCAAAGGAAGAGAAGAAGGTGGCTAGAGCAACATCATGGCTGACTCCTCTAACTCAACCACAGCTTCTGTGCCTTCCAATGATAAAGATTCATCATACCGCTCTTCCTTCGCTTCGCCTTTCGACGATGCTGATAAGTCCGCTCGACCACCGGCTCCGAACATCGGATGCCGGGTCTACTGCATCAACAGCTATTTTGTTGGGGAACCGAATTATTGTTACCAATGTTGGTGATTCCAGAGTAGTTGCTTCCAGAGCTGGTTCAGCTGTCCTTTTGTCCATTGATCACAAGCCTGATAGATCTGATGCACATCAGAGGATTAAAGAGGCTGGGGGATTCATTATTTAG 552 0.4964 MEKTWQTRKRKRRMRELFSVRIKGKDITELIAAGRERLVSVPGGRGTVAVTAAPAGGALAGGATPAAKAKEEKKVARATSWLTPLTQPQLLCLPMIKIHHTALPSLRLSTMLISPLDHRLRTSDAGSTASTAILLGNRIIVTNVGDSRVVASRAGSAVLLSIDHKPDRSDAHQRIKEAGGFII 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1849 183 Pfam 60s Acidic ribosomal protein 17 74 - -
Dere13g1849 183 SUPERFAMILY PP2C-like 112 182 IPR036457 -
Dere13g1849 183 ProSiteProfiles PPM-type phosphatase domain profile. 24 183 IPR001932 -
Dere13g1849 183 PANTHER PROTEIN PHOSPHATASE 121 182 IPR015655 GO:0004722|GO:0006470
Dere13g1849 183 Gene3D - 97 183 IPR036457 -
Dere13g1849 183 Pfam Protein phosphatase 2C 121 183 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1849 Dere-ChrDere13 25079182 25080302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1849 124 183 PP2C-type Phosphatase Gene Family AT1G43900 75.000 2.05e-23 93.6