Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1848 ATGAAGACCGGTACCGTGAATAATAACCACAACCCAGAGTGGGATAAAGAATTCACAATCTCTGTTCAGAATGAAAACACTCCAATTCATATAGAAGTGTTCGACAAAGACACATTGTCGAAAGATGACAAAATGGATGATGCAGATATAGACATAAAGCCATATCTTGAGTGTTTGAATATTAGCTTCAACAACCGCAAAAATGGCAATGTAGTGAAACCAGATGATAAAAACTACTGCCTCCCAGAGAACAGGAAGTACAAATGGAACGACGGAATACTCACCCAAGAAATGACACTCAAGTTGAGAAATACAATGTCCGGTTACGTCGTTGTCCAAATCAGCAACGAGTGA 354 0.3927 MKTGTVNNNHNPEWDKEFTISVQNENTPIHIEVFDKDTLSKDDKMDDADIDIKPYLECLNISFNNRKNGNVVKPDDKNYCLPENRKYKWNDGILTQEMTLKLRNTMSGYVVVQISNE 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1848 117 Gene3D C2 domain 1 85 IPR035892 -
Dere13g1848 117 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 115 IPR044562 -
Dere13g1848 117 ProSiteProfiles C2 domain profile. 1 65 IPR000008 -
Dere13g1848 117 Pfam C2 domain 2 54 IPR000008 -
Dere13g1848 117 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 61 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1848 Dere-ChrDere13 25058988 25060551 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1848 1 114 C2H2 Transcription Factor Family AT1G70790 41.176 1.19e-26 94.7