Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1815 ATGGAACCTAATGTCACCACCTCTAGTGCTATGCACTCCCATTGCTTCCAAATAAGCATGGAAGAACCGCACAAGGTTGTGCCACCACCCCACAGGACCACCCTTCAGAAGCTGAGGACCAAGCTCAAGGAAACGTTTTTCCCTGATGACCCTCTTCGCCAATTCAAGGGTCAGCCATTGAAGAGGAAGCTTGTCCTTGGAGCCCAGTATTTCTTCCCTATTCTTCAATGGGGTCCTAATTACAGCCTCTCTCTCTTCAAATCTGACATTGTTTCTGGCCTCACCATTGCTAGCTTGGCCATCCCTCAGGGAATCAGTTATGCTAAGCTAGCAAGCCTTCCTCCAATTGTGGGACTCTATTCTAGTTTTGTGCCTCCTCTGGTTTATGCTGTTCTGGGAAGCTCAAGGGACCTAGCGGTAGGACCTGTGTCTATTGCTTCTCTTGTGCTGGGGTCGATGCTGAGACAGGAAGTGTCCCCAGGTGGTGACCCTGTTCTGTTTCTTCAGCTAGCCTTCACTTCTACCTTCTTTGCTGGTCTCTTTCAAGCATCCCTCGGAATTCTAAGGCTAGGTTTCATCATTGACTTTCTATCAAAGGCCATCCTTATTGGGTTCATGGCTGGAGCTGCCATTATTGTGTCTCTGCAACAGCTGAAGAGCCTCCTGGGAATTACACATTTCACCACACAGATGGGTCTAATTCCTGTCATGACCTCCGTTTTTCACAATACCCATGAGTGGTCATGGCAAACGATAGTGATGGGGTTTTGCTTCTTGATGTTGCTCCTACTAGCGAGACACGTCAGCATGAGGAAGCCAAAGCTTTTCTGGGTCTCAGCTGGAGCTCCTCTTGTGTCTGTGATAATCTCTACCCTTCTGGTTTTTGCTATGAAGGCTCAACATCATGGCATCAGCGTTATTGGAAAATTGCAAGAAGGTCTAAATCCTCCTTCATGGAATATGTTGCGCTTTCATGGTGCTCATCTGGGTCTAGTAATCAAAACTGGGCTTATCACTGGCGTTTTATCCCTCACTGAAGGTATTGCTGTAGGAAGGACTTTTGCAGCTCTGAAGAACTACAAAGTTGATGGAAATAAGGAGATGATGGCAATTGGCTTCATGAATGTGGTTGGCTCCTTCACTTCCTGCTATGTTACAACAGGTGCTTTCTCTAGATCAGCAGTCAATCACAATGCAGGAGCAAAAACAGCAGTGTCAAATATCGTAATGTCTGTGACAGTTATGGTGACACTCCTGTTTCTTATGCCATTGTTTCAGTACACTCCGAATGTTGTACTAGGCGCAATCATAGTCACAGCAGTAATTGGCCTCATTGATATCCCTGCTGCTTATAACATCTGGAAGATAGACAAATATGATTTTATTGTAATGCTGACTGCATTCTTCGGTGTCATTATCATCTCTGTTCAGGAAGGCCTTGCTCTGGCAGTTGGGTTGTCAATTTTCAAGATCCTCTTGCAAGTTACAAGGCCTAAGACAGTAATGTTGGGGAACATACCAGGTACAGACATATATCGAAATCTTGATCATTATGAGGAAGCTGTAAAAACGCCTGGTTTTCTCATTTTAAGCATCGAGGCTCCCATCAATTTTGCAAACATCACATATCTCAATGAGAGGATTTTACGATGGATAGAAGAATATGAAGAGGAAGACAACATTAAGCAAAAGTCAAGCCTTCAATTCGTGATTCTGGATATGTCAGCTGTGAGTAACGTAGACACAAGCGGAGTATCACTTTTCAAGGAGTTGAAACAAGCAATGGAAAAGAATGGCGTTGAGCTTGTGTTGGTGAATCCACTAGCTGAGGTTATGGAAAAGTTGAAAAAAGCAGATGAAGGCAATGACTTTATAAGAGCAGATAACCTTTACTTGACAGTTGGAGAGGCTGTGGCTTCACTTTCATCAACAATGAAGGGCCAATCATCAAACATGGAATAA 1962 0.4424 MEPNVTTSSAMHSHCFQISMEEPHKVVPPPHRTTLQKLRTKLKETFFPDDPLRQFKGQPLKRKLVLGAQYFFPILQWGPNYSLSLFKSDIVSGLTIASLAIPQGISYAKLASLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPGGDPVLFLQLAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTTQMGLIPVMTSVFHNTHEWSWQTIVMGFCFLMLLLLARHVSMRKPKLFWVSAGAPLVSVIISTLLVFAMKAQHHGISVIGKLQEGLNPPSWNMLRFHGAHLGLVIKTGLITGVLSLTEGIAVGRTFAALKNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNHNAGAKTAVSNIVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAAYNIWKIDKYDFIVMLTAFFGVIIISVQEGLALAVGLSIFKILLQVTRPKTVMLGNIPGTDIYRNLDHYEEAVKTPGFLILSIEAPINFANITYLNERILRWIEEYEEEDNIKQKSSLQFVILDMSAVSNVDTSGVSLFKELKQAMEKNGVELVLVNPLAEVMEKLKKADEGNDFIRADNLYLTVGEAVASLSSTMKGQSSNME 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1815 653 ProSiteProfiles STAS domain profile. 517 641 IPR002645 -
Dere13g1815 653 Pfam Sulfate permease family 86 466 IPR011547 GO:0016020
Dere13g1815 653 ProSitePatterns SLC26A transporters signature. 115 136 IPR018045 GO:0008271|GO:0008272
Dere13g1815 653 Pfam STAS domain 518 637 IPR002645 -
Dere13g1815 653 FunFam Sulfate transporter 31 497 644 - -
Dere13g1815 653 PANTHER SULFATE TRANSPORTER 33 643 IPR001902 GO:0016020|GO:0055085
Dere13g1815 653 NCBIfam sulfate permease 73 621 IPR001902 GO:0016020|GO:0055085
Dere13g1815 653 CDD STAS_SulP_like_sulfate_transporter 518 634 - -
Dere13g1815 653 Gene3D STAS domain 497 644 IPR036513 -
Dere13g1815 653 SUPERFAMILY SpoIIaa-like 522 641 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1815 Dere-ChrDere13 24383104 24389671 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1815 22 648 Inorganic Solute Cotransporters AT3G15990 66.772 0.0 851