Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1812 ATGAATAGTGTCTTCAAGAAGAACAGGAAGACGAGATGGCATGTGAGTGCTGGCCATGGCTGTATCGGCAAGCACCGGAAGCACCCAAGAAGTCGAGGTAATGCCAGAGATGTAGAAACTGAGAGGAAGCCACGGATCGACTTGGAGGTGAAGAAAAGGAGAAGAAACGGACAGAGAAGAAGTCACGGACAAAAAAAAGAACAAACCGAGGAGAAACGGTGGGTCGAAGGAGAAAGTCATGAAGGAGAAGGATGTTTCAATATGAGGTTGTCAAGTAGTAGTACTGATCCAGAGCCTGTAGAAGCAGAAGTATTGGCAGAGGAAAATAGGAGAACTCAGCCACAGCAAGATGGAAAAGAAAGGGATGCTGAGGCCTTTATTCAAGATTCTATAAGAATGCTAGAGGAAGGTGGTGAAGGGGAGTCCTTTGTATGCATTAGAAGACTTAGATATCTCTCTCAGATATATATGAAATCACATCGTCTTGCTGATGCTGAGATGGCCCAAAGAAAGATTCTGCATAAAATGGAAATATCAAAGGGATGGAACTCCTTGGACACTGTTGCTGTGGTTGAAAGTTTAGCTCTGACTCTGCAAGCATCTAATACTTTAAATGATTCACAAGAGTTTCTTGAAAGATGTCTTAATGCCCGAAAAACCTTACTTCCTGGTGACCACATTCAGATTGGCACAAACTTGCTTCATCTAGCAAGGGGTGTGGTGCTTAACAGTAGCCAACTACAAAAATGGGATGCTTCTGGGAAAGCTGAGTTTGATAAGGCAAAGGATCATTTGAGCAATTTCATAAGGTTAATCTTCTTCCTTGTCAGTGCCACCCCTGTCAAGTCTCAATTCTGCTATATGTTCATTTGTGCCATTTTGATCAAGTATGCTTAA 897 0.4259 MNSVFKKNRKTRWHVSAGHGCIGKHRKHPRSRGNARDVETERKPRIDLEVKKRRRNGQRRSHGQKKEQTEEKRWVEGESHEGEGCFNMRLSSSSTDPEPVEAEVLAEENRRTQPQQDGKERDAEAFIQDSIRMLEEGGEGESFVCIRRLRYLSQIYMKSHRLADAEMAQRKILHKMEISKGWNSLDTVAVVESLALTLQASNTLNDSQEFLERCLNARKTLLPGDHIQIGTNLLHLARGVVLNSSQLQKWDASGKAEFDKAKDHLSNFIRLIFFLVSATPVKSQFCYMFICAILIKYA 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1812 298 MobiDBLite consensus disorder prediction 1 122 - -
Dere13g1812 298 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 115 271 - -
Dere13g1812 298 Gene3D Tetratricopeptide repeat domain 92 264 IPR011990 GO:0005515
Dere13g1812 298 MobiDBLite consensus disorder prediction 32 54 - -
Dere13g1812 298 MobiDBLite consensus disorder prediction 103 122 - -
Dere13g1812 298 MobiDBLite consensus disorder prediction 62 83 - -
Dere13g1812 298 MobiDBLite consensus disorder prediction 7 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1812 Dere-ChrDere13 24336066 24339544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1812 1 42 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 66.667 6.12e-11 57.8