Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1804 ATGTTGAGTGGTAAGCTGTTACCAGGGCAGGTCAGCGAGTCTAAAACGAACTATCTTCTGAGGTTGACTGGTTGCAGAGTAAAATCGAGTTTGGCAGTTTATGTTTTACAAGAAGCTAATTGGCTGCTAAATATGCTTGACAAAGAATTTTTCACCGAGTATGGGGAGGCAAGTCGGTACGAAATTCAAGAAGTGGTTGGCAAGGGCAGCTATGGTGTTGTTGCATCTGCAGTTGATACCTACAGTGGAGAGAAGGTAGCTATCAAGAGGATGAACAATGTCTTTGAACATGTTTCTGATGCCACACGCATTCTCCGTGAAATAAAGCTCCTCCGCCTACTCAAACATCCAGATATTGTAGAAATAAAGCACATAATGCTTCCTCCATGCCGAAGGGAATTCAAAGACATTTATGTGGTATTCGAGTTAATGGAATCTGATCTCCATGAAGTTATTGAAGCAAACCATGATCTCACTCCTGGACATTACCAATTCTTTTTGTACCAGCTTCTTCGAGCACTAAAATACATACATTCTGCTAATGTCTTCCATCGTGACTTGAAACCAAAAAACATTCTGGCTAATGCAGACTGCAAACTAAAGATTTGTGATTTTGGACTAGCTCGTGCATCATTTGGTGATGCTCCATCTGCCATTTTTTGGACAGATTATGTAGCAACACGATGGTACCGTGCTCCTGAACTATGTGGCTCGTTTTGCTCCAAGTATACCCCTGCTGTAGATATCTGGAGCATAGGATGTATATTTGCGGAAATGCTAACTGGGGAACCTTTATTTCCTGGAAACAATGTGGGGCATCAATTGGATCTCATAACTGACTTGCTTGGAACTCCTTCTGTCGAATCCATTGCTAGGATTCGAAATGAAAAAGCTAGAAGTTATTTAAGTAGCATGGGGAGAAAGCCATCCATTCCCTTCTCAGAAAAATTCCCCCATGCAGACCCAATATCTCTTAATTTACTTCAGCGCTTGCTTGCCTTTGATCCTACACAGCGACCATCCGCTGAAGAGGCATTAGCTGATCCATATTTTCATGGGTTAGCAAATTTGGCTGACAAACCATCCGTGAAACCAATTTCAAAGTTTGAGTTTGAGTTTGAAAGAAGAAAATTGACCAAAGATGATGTTAGAGAACTAATTTATAGGGAGATTTTAGAATATCATCCAGAGATGCTACAGGAGTATCTTCAAGGTGCTGGACAGACTACCTTTATGTATCCCAGTGGACTTGATGACTTCAAGCAGCAATTTGTTGATCTTGAGGAAAATAATGGCAAAGGAGAAAGAAGCACACAACACCCTAGGAAATATGCCTCGTTGCCCAGGGAGCGGGTCTGTGCAGCCAAGGAAGAGGAACAGACAACTGAAAGAGAGAACTCACTTAAGAACAAGAATGCAGCTTCTGTTATACGTGCAACCCTTCAGAGTCCTCGAAGGTCCCCAAGTGTCAAAAAACTGGAAGATGCCTGTAGAAATTCATTAACAATGCAGAACAGCTATTGCAAATCAGCTTACAATGGTCATAGACTTGTTAAGAGTGCTAGTATGAATGCTTCTATGTGTGCGGTTGTTATGGAACAAAATCCAGGAGGTAGAAATGATTGCAGCTGTTCTTGA 1638 0.4164 MLSGKLLPGQVSESKTNYLLRLTGCRVKSSLAVYVLQEANWLLNMLDKEFFTEYGEASRYEIQEVVGKGSYGVVASAVDTYSGEKVAIKRMNNVFEHVSDATRILREIKLLRLLKHPDIVEIKHIMLPPCRREFKDIYVVFELMESDLHEVIEANHDLTPGHYQFFLYQLLRALKYIHSANVFHRDLKPKNILANADCKLKICDFGLARASFGDAPSAIFWTDYVATRWYRAPELCGSFCSKYTPAVDIWSIGCIFAEMLTGEPLFPGNNVGHQLDLITDLLGTPSVESIARIRNEKARSYLSSMGRKPSIPFSEKFPHADPISLNLLQRLLAFDPTQRPSAEEALADPYFHGLANLADKPSVKPISKFEFEFERRKLTKDDVRELIYREILEYHPEMLQEYLQGAGQTTFMYPSGLDDFKQQFVDLEENNGKGERSTQHPRKYASLPRERVCAAKEEEQTTERENSLKNKNAASVIRATLQSPRRSPSVKKLEDACRNSLTMQNSYCKSAYNGHRLVKSASMNASMCAVVMEQNPGGRNDCSCS 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1804 545 ProSiteProfiles Protein kinase domain profile. 60 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1804 545 Gene3D Phosphorylase Kinase; domain 1 76 397 - -
Dere13g1804 545 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 59 401 - -
Dere13g1804 545 Pfam Protein kinase domain 60 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1804 545 Gene3D Transferase(Phosphotransferase) domain 1 146 374 - -
Dere13g1804 545 FunFam Mitogen-activated protein kinase 48 154 - -
Dere13g1804 545 CDD STKc_TDY_MAPK 59 396 - -
Dere13g1804 545 SMART serkin_6 60 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1804 545 ProSitePatterns MAP kinase signature. 95 198 IPR003527 GO:0004707|GO:0005524|GO:0006468
Dere13g1804 545 FunFam Mitogen-activated protein kinase 146 374 - -
Dere13g1804 545 SUPERFAMILY Protein kinase-like (PK-like) 55 355 IPR011009 -
Dere13g1804 545 ProSitePatterns Protein kinases ATP-binding region signature. 66 89 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1804 Dere-ChrDere13 24262808 24270298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1804 46 535 MAP Kinase Gene Family AT3G18040 71.837 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Dere13g1804 Pkinase 6.5e-67 CL0016