Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1795 ATGTCTTCAAAGGAGATCGTGAAGATGGAAGAAGGTAGAGCGGTGTCAAACAAGTCTGCGTTATGGGAATCTCCAAGGATGGTTCAAATGATACAAAAAGTAATTGCAGAGGTGATCGGAACGTACTTGCTGGTATTTGCAGGGTGTTGTTCAGTGGTTCTGGAAAAATTACATGGAAATATAACATTTCCAGGAATATGTTTTGTGTGGGGATTCACTGTAACCATCTTGATTTATTCAATCGGTCACATCTCTGGTGCTCATTTTAATCCAGCAGTCACCATCACCATGACTGTGCCTATGTATATCGTTGCACACGTGTTAGGGTCGATCCTTGCAAGTGGGTCATTGTATATATTGTTTAAAACGGATGAAAAAACATTTTTTGGAACAATACCCGCAGGAAGCGATGTTCAGTCTCTTATGTTCGAAATCCTCACCACTTTTTTCTTGTTGTTTGTTGCCTGTGCCATTTCTGACAAAAATGCGTTTGCACAGTTCGGAGGAGTTACTATTGGGTTTGTAATCATAGTAGATGTCTTCATTGCTGGGCCTGTTTCAGGAGCATCAATGAACCCAGCAAGAACTATTGGGCCTGCTCTTGTGATGGGCATATACAAGGGACTTTGGGTTTATATAATTGGCCCATTTGTTGGGGCCCTTCTTGGAGCCTTTGCCTACCACCTCATTAAAATTTCTGACACTCCCGATCAATAA 717 0.417 MSSKEIVKMEEGRAVSNKSALWESPRMVQMIQKVIAEVIGTYLLVFAGCCSVVLEKLHGNITFPGICFVWGFTVTILIYSIGHISGAHFNPAVTITMTVPMYIVAHVLGSILASGSLYILFKTDEKTFFGTIPAGSDVQSLMFEILTTFFLLFVACAISDKNAFAQFGGVTIGFVIIVDVFIAGPVSGASMNPARTIGPALVMGIYKGLWVYIIGPFVGALLGAFAYHLIKISDTPDQ 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1795 238 Gene3D Glycerol uptake facilitator protein. 1 237 IPR023271 -
Dere13g1795 238 PANTHER AQUAPORIN NIP2-1 15 234 IPR034294 -
Dere13g1795 238 PRINTS Major intrinsic protein family signature 173 195 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere13g1795 238 PRINTS Major intrinsic protein family signature 32 51 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere13g1795 238 PRINTS Major intrinsic protein family signature 70 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere13g1795 238 PRINTS Major intrinsic protein family signature 210 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere13g1795 238 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere13g1795 238 Pfam Major intrinsic protein 27 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere13g1795 238 SUPERFAMILY Aquaporin-like 26 235 IPR023271 -
Dere13g1795 238 ProSitePatterns MIP family signature. 88 96 IPR022357 -
Dere13g1795 238 ProSiteProfiles PUA domain profile. 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1795 Dere-ChrDere13 24191504 24193227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1795 1 236 Major Intrinsic Protein MIP AT5G37820 47.809 3.48e-80 241