Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1791 ATGGAGGCTGATACAGTAGGTTCGTCTTCGTCTTACTACAGCATTCTCGGTGTCGATTCGGATTGTTCCATTGAAGAAATAAGGCGTGCTTATCGCAAGCTCGCAATGCAATGGCATCCGGACAGGTGGACAAGAACGCCTTCTTTACTGGGAGAAGCCAAACGGAAGTTCCAGCAAATTCAGGAAGCCTATTCGGTATTATCAGACCACAATAAAAAAACAATGTACGATGCAGGCTTGTATGACCCCCAAGAAGAAGAGGATGAGGGATTTTCTGATTTTGTGCAAGAATTGATGACTCAAGTGAGCAGAGAGGAGAAGGAATATAGTATGGAGGAGTTGCAGAGCATGCTTATGGAAATGGCTGAAGGATTTAAGACTCCTATATGGCAGTGTGGACCCTCACCAGTTGTTGATGAATCCCAGTGCTCAAAGAGGGCACGTTTGGACTCAAACTTGAAGATGAAGAATTCAGGGTCACATTTTCAGGGACCTGGCCTTCAATTGTATGAAACAAGGGGTTGTTGTAATTAA 534 0.4438 MEADTVGSSSSYYSILGVDSDCSIEEIRRAYRKLAMQWHPDRWTRTPSLLGEAKRKFQQIQEAYSVLSDHNKKTMYDAGLYDPQEEEDEGFSDFVQELMTQVSREEKEYSMEELQSMLMEMAEGFKTPIWQCGPSPVVDESQCSKRARLDSNLKMKNSGSHFQGPGLQLYETRGCCN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1791 177 Coils Coil 95 115 - -
Dere13g1791 177 SMART dnaj_3 10 72 IPR001623 -
Dere13g1791 177 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Dere13g1791 177 ProSiteProfiles dnaJ domain profile. 11 80 IPR001623 -
Dere13g1791 177 Gene3D DnaJ domain 8 124 IPR036869 -
Dere13g1791 177 CDD DnaJ 12 69 IPR001623 -
Dere13g1791 177 SUPERFAMILY Chaperone J-domain 9 83 IPR036869 -
Dere13g1791 177 PANTHER PUTATIVE, EXPRESSED-RELATED 7 131 - -
Dere13g1791 177 Pfam DnaJ domain 12 77 IPR001623 -
Dere13g1791 177 PRINTS DnaJ domain signature 52 72 IPR001623 -
Dere13g1791 177 PRINTS DnaJ domain signature 31 46 IPR001623 -
Dere13g1791 177 PRINTS DnaJ domain signature 13 31 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1791 Dere-ChrDere13 24158698 24160177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1791 12 78 C2H2 Transcription Factor Family AT1G74250 41.176 1.26e-11 60.5