Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1775 ATGGTGGCTTTTGGCGGGAAAAAGGTGCGCCATATTTTAGGAGGCAATGGTCTAGGCCACGTCATCGCCGCGGCGGCCGTTACTCTCCTCCTCCGCCTATTCTCCGGTTCCGGCCCCGAACTCTCGCCGGAAAGTGAGAATGAGGACTACGGTGATAGGGAAGAGAAGGATCTTGACAGTGGTGAAGCTCCGGTCTCCGGAAGAGTTTTGCCAGTCACAATTCGGTGGAGTAGTATCACGTGCTCCCTTTCTGATAAATCCTCCGAGTTTGTGAAATTTATGCTTAAAAATGTGAGCGGGGAAGCGAAACCCGGAAGATTGTTAGCTATAATGGGGCCGTCAGGTTCAGGAAAAACAACGTTGCTCAATGTTCTTGCAGGTCAACTGGCAGCGTCGCCTCGGCTGCATTTGTCAGGCCATTTGGAGCTCAACGGAAAGACTATTTCGAACAAAACTTACAAGTTTGCTTACGTAAGACAGGAAGATCTTTTTTTCTCGCAGCTCACTGTGCGGGAAACCTTGTCTCTTGCTACAGAACTACAGCTTCCTGGCATGTCTTCAGTGGAAGAGAGAGATGAATATGTGAACAATCTTCTGTTCAAACTGGGCTTGGTCAGTTGTGCTGATGCCAATGTCGGTGATGCCAAAGTTCGTGGAATTAGTGGTGGTGAAAAGAAACGGTTAACTCTAGCATGTGAGCTGATTGCAAGCCCATCTGTTATATTTGCGGATGAACCCACCACCGGACTTGATGCCTTCCAAGCTGAAAAAGTCATGGAGACTCTCCATCGCCTTGCACATGATGGTCATACTGTGGTTTGCTCTATTCATCAGCCAAGAGGTTCAGTGTATAGCAAATTCGATGACATTGTCTTGGTAACAGAGGGTTCACTTGTTTATGCTGGTCCTGGTCGTGAAGAAATATTGGCATACTTCTCAAAATTGGGGTACCAATGCCCTGATCATGTGAATCCTGCTGAATTTTTGGTTGATCTTGTATCCATCGACTATAGTTCTGATGAAACTGTCCATTCCACTCAAAAAAGAATTGACGGTCTTGTAGAGTCATTCTCACAAAGACTACCTACAACAATGTATGCAACGCCTATAACCAGAGAAGAGCTCTCCAGAGGTGGAAAGAAAATCAGCAAAAGAACTGCAGCTAAGAAGAAAGGAGGTTGGTGGAAACAATTCTGGTTGCTTCTCAAGCGAGCATGGATGCAGGCTTTTCGTGATGGACCAACAAACCAAATGCGGGCAAAAATGTCATTTGCATCAGCAATTATATTTGGGTCTGTTTTTTGGAAAATGGGAAATTCTCAGACTTCAATACAAGATAGAATGGGATTGCTTCAGGTTGCTACAATAAGCACAGCTATGGCTGCTCTCACGAAGACTGCTGGTGTGTTTCCAAAGGAACGTGCTATTGTGGACAGACAACTTGCAAAAGGCTCGTACAACCTGGGTCCATATCTTATTTCAAAATTGTTGGCTGAGATTCCCATCGGAGCAGTATTTCCATTAATGTTTGGCGCTGTTTTATACCCGATGGCACGTCTTCATCCTACTTTGCTGAGATTTGGAAAATTCTGTGGTATTGTCACCATGGAATCTTTTGCTGCATCTGCAATGGGACTTGCTGTAGGGGCTATGGTTCCAACCACTGAAGCAGCTGTGGTTGTTGGTCCCTCTCTTATGACAGTTTTTATTGTATTTGGAGGTTACTATGTCAATCCTGAGAATTCCCCAATCATCTTCCGCTGGATTCCTCGTGTTTCTCTTATTAGATGGGCCTTTCAGGGACTCTGCATCAATGAGTTCAGTGATCTTCAATTTGATCATCAGCATTCATTTGATGTTCAAACTGGAGAACAGGCACTAGAGCGCATTTCCTTTGGAGGAAGTAGGGTCAAGGATACGGTGATAGCACAAAGTAGAATACTGTTACTTTGGTATTGCGTCACCTACTTTCTCCTGGAGATAAACAAGCCCAAGTACCAGCAACTTGAGCCACCCCTTTATCACAAGTCCCATGTAAAACTTGAGGAGTTTAACCCTGAACATGTTGACCAGCCTCTTGAACCTTCACCAATCAGTCAAGTTGAATCCAACCTGCAGCTTGAATCTCCTCAACTTGATCTTATTGGACCTTTTATGCTAGAAGGTTTGTAA 2172 0.4489 MVAFGGKKVRHILGGNGLGHVIAAAAVTLLLRLFSGSGPELSPESENEDYGDREEKDLDSGEAPVSGRVLPVTIRWSSITCSLSDKSSEFVKFMLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGHLELNGKTISNKTYKFAYVRQEDLFFSQLTVRETLSLATELQLPGMSSVEERDEYVNNLLFKLGLVSCADANVGDAKVRGISGGEKKRLTLACELIASPSVIFADEPTTGLDAFQAEKVMETLHRLAHDGHTVVCSIHQPRGSVYSKFDDIVLVTEGSLVYAGPGREEILAYFSKLGYQCPDHVNPAEFLVDLVSIDYSSDETVHSTQKRIDGLVESFSQRLPTTMYATPITREELSRGGKKISKRTAAKKKGGWWKQFWLLLKRAWMQAFRDGPTNQMRAKMSFASAIIFGSVFWKMGNSQTSIQDRMGLLQVATISTAMAALTKTAGVFPKERAIVDRQLAKGSYNLGPYLISKLLAEIPIGAVFPLMFGAVLYPMARLHPTLLRFGKFCGIVTMESFAASAMGLAVGAMVPTTEAAVVVGPSLMTVFIVFGGYYVNPENSPIIFRWIPRVSLIRWAFQGLCINEFSDLQFDHQHSFDVQTGEQALERISFGGSRVKDTVIAQSRILLLWYCVTYFLLEINKPKYQQLEPPLYHKSHVKLEEFNPEHVDQPLEPSPISQVESNLQLESPQLDLIGPFMLEGL 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1775 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 306 IPR027417 -
Dere13g1775 723 FunFam ABC transporter G family member 7 72 310 - -
Dere13g1775 723 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 57 637 - -
Dere13g1775 723 Pfam ABC-2 type transporter 397 607 IPR013525 GO:0016020|GO:0140359
Dere13g1775 723 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524|GO:0016887
Dere13g1775 723 Pfam ABC transporter 95 247 IPR003439 GO:0005524
Dere13g1775 723 Pfam ABC-2 type transporter 277 348 IPR043926 GO:0140359
Dere13g1775 723 MobiDBLite consensus disorder prediction 38 64 - -
Dere13g1775 723 CDD ABCG_EPDR 71 302 - -
Dere13g1775 723 SMART AAA_5 104 297 IPR003593 GO:0016887
Dere13g1775 723 Gene3D - 72 312 IPR027417 -
Dere13g1775 723 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 320 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1775 Dere-ChrDere13 23874933 23882725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1775 94 306 Calmodulin-binding Proteins AT2G36910 27.650 6.12e-12 67.4