Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1733 ATGGAGCGTAATTCCCCGAACCGCTCAAATACGCTTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCCGCCCCTCTCATTCTCCCGCTCCACACCACAGTCTTCTCTTTTGCCTGTTCGCTCACATTTCAAAGATCGGATCCGATGGGGCGAGAAAGTCACAAAATGAAGGCATTAAGCCTGCTGAGAACCAGAATCTGTGACCCCAAATTTATATTCAAGCCTCTCCACGATTCTCCAGAAAGCAACTACAGCAAGCTGAAATTCATGATATCTAGTTCAATTACTGAGGCATGCAATAATTCTATTCTGCTTCTTGGCCCCCGTGGCTCTGGGAAATCAGCGGTTTTGGAGCTCACTATTGGAGATTTATTGGTGGAATATCAGGACATGATTTCTGTGATCAGGTTGAATGGGCTTTTACATAGTGATGACAACTGTGCATTAAAGGAAATAGCTAGGCAATTATGCATGGAGCATCAACTGCAATTCTCAAAAGCGGCATCATTTGATGACAACTCCCAATTCATGATAGCCATGCTAAAGGAGTGTGGATTAGCACATAAAACAGTTATTTTTGTTCTGGATGAGTTTGACCTGTTTGCTCAGGGTAAACAGAGATTACTTTATAGCTTACTAGATGCTATGCAGTCCGTAACATCACAGGCTGTTGTAATTGGCATTAGTTGCCGGCTGGACGCAGATCAGCTGTTGGAAAAAAGAGTACGATCTCGTTTTTCGCATAGAAAGTTGATGTTCCTTCCACCTTCAATGGAAGACTCAAAGAGAATTTTGGAGCACATAATGTCATTACCAATAGATTCAAGCCTTCCACATGATTATGCAGTTGAGTTCAATAGAAAGATTCAAGATATTGTAGAAGATAGAAGATTCAAAGAAACCTTCAATAAATATTTGAATTTTGACTCCTCAGTCAAACATTTGCTGCGGTTTCTATTCTGTGCAGTCTCTTGTATGGATTTGCAGACTGGATTCATGACATACGAGAACTTTGAAACTGCATTTTCAAGTATCCAGAGGCAACCCAAATTGGAATGTTTAAAAAATTGCTCCATATTAGAACTTTACATCCTGGTTTGCATGAAGAGATTGGAAGTTAAAGAGCAGAACTTTATCAACTTCAATTCTGTAATGAAAGAGTATAAAAACATACACGATTCCTTCCAGACTTCTGATTATTATGCGAGAAATGTCTGTTTAAGGGCATTTGAACATCTTATAAACCGTGAATTGATATGTTTCACTGACAACAGAGGATACAGTTCGTCTGTTGAATTTCGCCCTGTAAAGCTTTTAATTACGTCTGCGGAACTACATCAAGGACTAAGAGCATATCATTCATGCCCTGCTATTCTTCAGAAGTTAATGGATCGCGAAGGCTAA 1401 0.399 MERNSPNRSNTLLSLSLSLSLSAPLILPLHTTVFSFACSLTFQRSDPMGRESHKMKALSLLRTRICDPKFIFKPLHDSPESNYSKLKFMISSSITEACNNSILLLGPRGSGKSAVLELTIGDLLVEYQDMISVIRLNGLLHSDDNCALKEIARQLCMEHQLQFSKAASFDDNSQFMIAMLKECGLAHKTVIFVLDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVIGISCRLDADQLLEKRVRSRFSHRKLMFLPPSMEDSKRILEHIMSLPIDSSLPHDYAVEFNRKIQDIVEDRRFKETFNKYLNFDSSVKHLLRFLFCAVSCMDLQTGFMTYENFETAFSSIQRQPKLECLKNCSILELYILVCMKRLEVKEQNFINFNSVMKEYKNIHDSFQTSDYYARNVCLRAFEHLINRELICFTDNRGYSSSVEFRPVKLLITSAELHQGLRAYHSCPAILQKLMDREG 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1733 466 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 54 465 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Dere13g1733 466 FunFam Origin of replication complex subunit 4 80 254 - -
Dere13g1733 466 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 263 446 IPR032705 -
Dere13g1733 466 PIRSF ORC4 44 466 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Dere13g1733 466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 270 IPR027417 -
Dere13g1733 466 Pfam AAA ATPase domain 84 220 IPR041664 -
Dere13g1733 466 Gene3D - 79 254 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1733 48 463 Core DNA Replication Machinery Family AT2G01120 65.485 0.0 580