Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1724 ATGGGATTGCAAAACCAGTTAAACGACGTCTCTTCGGGTTCGATTCCCCTGCTTCTTCTGGTTCACATAGCGAACTGGGTCAATTACCTCCGTTCCTTCCTCCTCGGTTTCCTCCAATCCCTCGGCCTCTCCAGATTCGACTCCAACCCGGTCGTCGTCGATGATGCCTTCTTAACCGCCGTCGGGTCGGGCTTCGCCGGCCTTATCATGCTCTCCGACCAGCTCCACGCCAACCACGACCTATCCGACAGGTACACCGTCTCTCCCGACACCGGCAACGGTGGTTCTGCCTTCGCGATTGTGGATTCCAACTGTGTGGTGTGCCATAGTGAGTATAGGGATGGGGACCAGGTTCGGAGGCTACCGTGCCGTCACGTGTTCCATAGACGCTGCTTCGATGGTTGGCTCGACCAACTCAAGTTTAACTGCCCTCTCTGTCGGTGTCCGCTCGTCTCCGACGAGCGCGTGGCCGTCACCGAGAGGCGCGTCGGTAGAGAAGTCTTATCCTGGTTCTCTTTACGGTGA 525 0.5733 MGLQNQLNDVSSGSIPLLLLVHIANWVNYLRSFLLGFLQSLGLSRFDSNPVVVDDAFLTAVGSGFAGLIMLSDQLHANHDLSDRYTVSPDTGNGGSAFAIVDSNCVVCHSEYRDGDQVRRLPCRHVFHRRCFDGWLDQLKFNCPLCRCPLVSDERVAVTERRVGREVLSWFSLR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1724 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 157 IPR013083 -
Dere13g1724 174 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Dere13g1724 174 SMART ring_2 105 146 IPR001841 -
Dere13g1724 174 PANTHER RING ZINC FINGER PROTEIN-RELATED 92 158 - -
Dere13g1724 174 Pfam Ring finger domain 104 147 IPR001841 -
Dere13g1724 174 SUPERFAMILY RING/U-box 104 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1724 Dere-ChrDere13 23303408 23303932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1724 1 173 C3H Transcription Factor Family AT1G15100 47.126 3.12e-45 144