Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1720 ATGGAGAGAGTTTGTGAATTCTGCACAACTTTGAGGCCAGTTGTTTATTGTCAGGCTGATGAAGCATATCTTTGTCTATCCTGTGATGCAAAGGTCCATTTAGCCAATGCATTGTCCAGCCGGCACCTCAGAACCCTTCTATGTAACCTATGCAGAAACCATCTTGCCTATGTGCAGTGTTTGGATCACCAAATTTTGATCTGCCGTGGCTGTGATCAAAAGCTGCATGATCTCTCCTTAAAATACCAGAAACGAGCTATCAGAAGTTACATCGGTTGCCCTTCTGCCAAAGACTTTGCAGTACTCTGGGGTTTTGAATTTAATGAGATTGAAAGCAATGATCATTCAGATAAGCTTGCATCCATTTCATGTGGTTCTGTAGAATTGAATGCAGTACATGTCTCAAGACAGCCTGGCATTCAAACTGGAGGCCCTTCAATTGTATCTGGGGCCAAATTTGAAGGGGGATGTAGCAGTCAACAAGGTCAGAAATTGTACAAAGATCAAGAGCGACAAACTATTCTGCTGCAGATTATTGATTTGAAAAGGCTTCAGCTCGGTGAGAGTTACCATTCTCCGAAGATAACTGGGCCACAACAAACAGACTTGTCCTCTTCAATGTATCATAGTCGAAAGAACTATGATGAAAAATGTGATCAGCAAGCACAAAATCCCCAGGATTCTACTAATAATCTTCAGGAAAAAGGCAGTCCCATGGCAGAGCTGAATTTTGAAAGTTCGTCATCTACATTTTCTGAACTTGATAATTTACCTTCTTCTCCAATTGTAGACCTTCCCTTGCACACCGAGTTCTTCTGGGCATGCAAAAGTCCACTTCAAAGTAATCAGTTGTGGTCTCATAATATACAAGACCTTGGGATATGTGAGGACCTTATTTGTCAAGACGATGTTAACATACCTGAAGTTGACTTAACATTCCAAAACTTTGAAGAACTATTTGGAGGAGATCAAGATCCAGTTAGAGGACTGCTTGGTGATGATGATGTCTCCTGCTCTTCTACAGAGAAGGATATATCGCTTGATAAGTCAGATATTTACAATGAAAGCACAGTGGAGGACTGTTTGGAAGCTGCGTCCATTGCTATCTCCCAATCTGCTCTTGAGGACAAGGATATTGATTCTCGCAGCCAATATGATCCAATAAACATGGACCCTCCTCAAACATATAGACCATCTCGTTCAGCTATATCACTCTCCGTTTCAAGATTTAATGCTGAAAGCAGTCGTTCTGATGACCATGACAATGGTCTTTCTCCCTACAGTGAAGGGAAAGGAAATTCTCGAAATTTCCCTGAATTGGAGGTAGCAAACTTGGAGACCAAAGGAAATGTCACTGTGAGGCATGAAAAGAAGAAATCTCAACTGCGTGAAAAGCAAGCTCGAGTTCAGTCCAGGAAACCTGGGGCTAATGTAAGAAAGAGAGTGAAAGGACAAATTGCCAAGGCAGAAAGCTATTAA 1479 0.4165 MERVCEFCTTLRPVVYCQADEAYLCLSCDAKVHLANALSSRHLRTLLCNLCRNHLAYVQCLDHQILICRGCDQKLHDLSLKYQKRAIRSYIGCPSAKDFAVLWGFEFNEIESNDHSDKLASISCGSVELNAVHVSRQPGIQTGGPSIVSGAKFEGGCSSQQGQKLYKDQERQTILLQIIDLKRLQLGESYHSPKITGPQQTDLSSSMYHSRKNYDEKCDQQAQNPQDSTNNLQEKGSPMAELNFESSSSTFSELDNLPSSPIVDLPLHTEFFWACKSPLQSNQLWSHNIQDLGICEDLICQDDVNIPEVDLTFQNFEELFGGDQDPVRGLLGDDDVSCSSTEKDISLDKSDIYNESTVEDCLEAASIAISQSALEDKDIDSRSQYDPINMDPPQTYRPSRSAISLSVSRFNAESSRSDDHDNGLSPYSEGKGNSRNFPELEVANLETKGNVTVRHEKKKSQLREKQARVQSRKPGANVRKRVKGQIAKAESY 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1720 492 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 490 - -
Dere13g1720 492 MobiDBLite consensus disorder prediction 387 412 - -
Dere13g1720 492 MobiDBLite consensus disorder prediction 219 241 - -
Dere13g1720 492 MobiDBLite consensus disorder prediction 376 492 - -
Dere13g1720 492 SMART bboxneu5 1 47 IPR000315 GO:0008270
Dere13g1720 492 CDD Bbox1_BBX-like 4 47 - -
Dere13g1720 492 MobiDBLite consensus disorder prediction 214 241 - -
Dere13g1720 492 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Dere13g1720 492 MobiDBLite consensus disorder prediction 450 470 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1720 1 327 C2C2-CO-like Transcription Factor Family AT1G68190 38.671 1.03e-62 206