Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1714 ATGAGCATCAGCTTCCACGTCGTTAGCCCGTCTTTTTCTTTTTCTTCTCTCTCCTGCAAAGGAGGCAGCCCACATAGCACCCTAAACCTCCCCCAAACCTCTTCTCCACCACCACCACCACCCCTCATGGAGGCTCCCGCCACTGCTTCCCCGCTCTCCTCCGCCGTGCCTCCACCGCCTAATCTCAACTACCCTGACTCTGTCGACTCCTCTCCTCGCTCCCGGAACACCGATTCCTGGGATGAGCCTGTCCTTCCGGCTGCCGCCTCCAACAAGCTACGTCTCATGTGCAGCTACGGCGGCCACATCGTCCCTCGCCCCCACGACAAGTCCCTCTGTTACGTTGGTGGCGAAACGCGTATCGTTGTCGTTGAACGCCACACCTCCCTGTCCGACCTTTCCTCTCGCCTCTCCAAAACCTTCCTCAACGGCCGTCCCTTCACTCTCAAATACCTGCTTCCGAGTGAAGACCTGGATTCTCTTATTTCTGTGACCACTGATGAAGACCTCGATAACATGATCGATGAGTACGATCGAATTTCTAATTCGTCACTGAAACCCTCTAGAATCCGCCTTTTCTTGTTCCCAGTGAAACCCGATTCATCTCAATCGATACCTATAATTAATAGCTCAGCGAAGTCGGAGGATTGGTTTCTGGGTATGCTTAACAGAGGGTTATCGGACTCTAATTCCGTCAATTTGTTGATGGTTTTTGACGATGAGGTTGTTGCTAGCAATCTGGATGCGGGTTCGAAAGACGTCGAGGCTGCGGGTTCTGGATCTTTTGGGAATGGCAAGAGTGTGAAGCAGCAGGGCCAGGATGTTCACTCTGTGCCCGATTCACCTATGCTGGAAACCACGTCGTCTTTTGGGTCCACTTCTTCGTCCCCTTCGGTGGCGAATTTACCGCCGATTCGGGTTCATGTTGATGATGGCAGTGGTGGTGGAGCGAGGGTGCAGGATCAGAAGGTGGTGGGGATTGAGGATCAGTTTGCTCAAATGGGTATTGGTGGTGGGCAGAAGCAAGATGAGGGTTTTCTGCTGTCTTCACCTCCTCCTATGCCGGTGTCCGGTGTTTCATCTGCCCCAGGTGTGCCGATCAGCTCCTCGGTGGCTTCCGGTGAATACCAGAATCGTGTTGTCTCTGATGATGAGAGATCAGAACATGGGGTCCTTGGGGGTTATAGAAAACCTCCGACACCACAGCCACAGACGCTTCCTCAGCCTCAGATTCTGCATACTCAATTTCAGCAGAAGTCTACCGGAGGCGTTGATTTGCCTTCCCCAGATTCAGTTTCAAGTGATAGTAGTATTACAAATGCAATGTCACGCCCAAAGCCTGTGCTCTATCAAGACCAAGTTCAAGTCCAAATTCCCTCTGGAACTACAAGGGTTCCCAGTAATCCCAATGATCCAAAACTTACCATGTCTGACTCACATGGTCGGATCCAAATGCAGCAACAAGTGCTGGATCAGGGATATGTTTTGCATGCGCAATTTGATCAACAACAGCAACAGCCTCAACAGCAGCAGCAATATATACATGGTACACAGCAACAAGTACAGGATCCGGGATATGTATTGCAACCTCAATTCGATCAAGGACAGCAGCAATTTATACATGGCACACATTTCATTCACCATACCCCTTCAGGGGCTGTGCCACTCCCAGCATATTATCCTATTTATCCTTCCCAGCAGCAGCTTCATCCCCAGCATCATCATCAACTTGAACAGCAATATCAGATTATCTATGTGCCTGCTAGACAGACCCAACCTTATAATTTGTCTGCACAGCAACCTAATATTAGTGAACCTGCCACAACAATTCCTTCAAGCCGCACCCAAACAGCACCAAATCCTGCAATAGGTCCACCATCTGCAGGTTACAACCCCGTAAGAAATGCTCCAGCACCTAAATCTGAAATGACAGCAGGTGCATACAGAACAGCAATTGCAGGCACCCCTCAATTGGTTCAAGTTCCTTCTGGTCAGCCTCAGCAACAATTTGTTGCCTACTCCCAGTATCATCATCCGTCTCAGTCTGTTGCCCCCAATCCTGCTGCCCCCTCTAATTATTCTTATGAGTATGCTGATCCTGCTCATGCCCAGATATACTACTCTCAGCCTCTGGCTCCCACAATGCATTCACAGTACCAAACTATGACAGGTACTGCTGCAGTACTATCAGATGTTACTGCTCAGCCTCCCTCAGACAACATGAAGCAGCAAATAAGAACATCACAGCCATTTCAGCCGTTGCCAAGTTTGAATTGGACTGTCTCTGATGGAAACTACATCTGGAATTATTCCAAGGTGTCAAGTAGAAACTGCATAAGAATTGCTATTTATTTTGGTTTTCTTGATGATCTTGTGAATTTTATGTGGGCATTGCAAGCAGCAGAGTAA 2409 0.4911 MSISFHVVSPSFSFSSLSCKGGSPHSTLNLPQTSSPPPPPPLMEAPATASPLSSAVPPPPNLNYPDSVDSSPRSRNTDSWDEPVLPAAASNKLRLMCSYGGHIVPRPHDKSLCYVGGETRIVVVERHTSLSDLSSRLSKTFLNGRPFTLKYLLPSEDLDSLISVTTDEDLDNMIDEYDRISNSSLKPSRIRLFLFPVKPDSSQSIPIINSSAKSEDWFLGMLNRGLSDSNSVNLLMVFDDEVVASNLDAGSKDVEAAGSGSFGNGKSVKQQGQDVHSVPDSPMLETTSSFGSTSSSPSVANLPPIRVHVDDGSGGGARVQDQKVVGIEDQFAQMGIGGGQKQDEGFLLSSPPPMPVSGVSSAPGVPISSSVASGEYQNRVVSDDERSEHGVLGGYRKPPTPQPQTLPQPQILHTQFQQKSTGGVDLPSPDSVSSDSSITNAMSRPKPVLYQDQVQVQIPSGTTRVPSNPNDPKLTMSDSHGRIQMQQQVLDQGYVLHAQFDQQQQQPQQQQQYIHGTQQQVQDPGYVLQPQFDQGQQQFIHGTHFIHHTPSGAVPLPAYYPIYPSQQQLHPQHHHQLEQQYQIIYVPARQTQPYNLSAQQPNISEPATTIPSSRTQTAPNPAIGPPSAGYNPVRNAPAPKSEMTAGAYRTAIAGTPQLVQVPSGQPQQQFVAYSQYHHPSQSVAPNPAAPSNYSYEYADPAHAQIYYSQPLAPTMHSQYQTMTGTAAVLSDVTAQPPSDNMKQQIRTSQPFQPLPSLNWTVSDGNYIWNYSKVSSRNCIRIAIYFGFLDDLVNFMWALQAAE 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1714 802 ProSiteProfiles PB1 domain profile. 92 197 IPR000270 GO:0005515
Dere13g1714 802 MobiDBLite consensus disorder prediction 258 306 - -
Dere13g1714 802 PANTHER OS05G0427100 PROTEIN-RELATED 63 526 - -
Dere13g1714 802 Pfam PB1 domain 108 196 IPR000270 GO:0005515
Dere13g1714 802 MobiDBLite consensus disorder prediction 31 65 - -
Dere13g1714 802 MobiDBLite consensus disorder prediction 16 83 - -
Dere13g1714 802 MobiDBLite consensus disorder prediction 368 448 - -
Dere13g1714 802 Gene3D - 112 196 - -
Dere13g1714 802 SMART PB1_new 107 197 IPR000270 GO:0005515
Dere13g1714 802 MobiDBLite consensus disorder prediction 263 301 - -
Dere13g1714 802 MobiDBLite consensus disorder prediction 407 446 - -
Dere13g1714 802 SUPERFAMILY CAD & PB1 domains 108 204 - -
Dere13g1714 802 MobiDBLite consensus disorder prediction 16 30 - -
Dere13g1714 802 CDD PB1_UP2 96 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1714 Dere-ChrDere13 23156268 23159419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1714 67 208 MAP Kinase Kinase Kinase AT1G04700 43.357 1.21e-23 105