Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1711 ATGCTTCCTTTGGTTTCTTTGCTTCTTCTTCTCTGCAACCATCTTTCACCTGTGACTTCTCTAAATGCCGAAGGCTCTGTTCTTTTGGCTCTTAAGCAGTCCATCACAGACCCAGAAGGCTCTATGAGTAACTGGAATTCTTCTGATGAAACCCCTTGTTCGTGGAATGGGGTTACATGCAAGGAACAGATTGTTGTGTCCATTAGTATTCCAAAGAGGAAGCTTTATGGCTTCCTTCCTTCTTCTCTGGGATCTCTGTCTCAGCTTCGCCATGTAAATTTCAGGAACAACAAGCTCTTTGGGAGGTTGCCTCCAGAGCTATTTGAAGCACAGGGACTGCAAAGTTTGGTACTTTATGGCAATTCCTTTTCCGGGTCTGTTCCAAAAGAGATTGGGAAGCTCAGGTACCTTCAAACCTTAGATTTATCACAAAATTTTTTCAATGGGTCTTTACCTGCTGCGATTGTTCAATGCAAGAGACTCAAAACACTTGTTCTGAGTCGAAACAATTTCACGGGTCCTCTTCCAGATCGATTTGGCACTGATTTGTTCTCCCTGGAGAAACTTGACCTTTCTTTCAATTACTTAAATGGTTCAATCCCTAGTGGCATGGGGAATCTCTCAAACCTACAGGGAACTGTAGATTTATCTCATAATCATTTTAGTGGTTCAATACCACCCAGCCTTGGTAATTTGCCTGAGAAGGTTTATATTGATCTTACTTTCAACAATTTGAGTGGTGCAATACCACAAAATGGTGCTTTGATGAACAGAGGACCGACAGCCTTTATAGGCAACCCTGGTCTCTGTGGGCCTCCTTTGAAGAACGCGTGTTCTTCTGAAACTCCAGGTGCTAGCTCACCTTCCTCATTTCCATTTCTGCCAGACAACTACCCACCTCAGGATTCTGATAATGCTTTCCGGAGAAGTGAGAAAACCAAAGGGTTAAGTAAGGGTGCTATTATAGGCATTGTTGTAGGTGATATAGTTGGAATTTGCCTCTTGGGTTTGCTGTTCTCTTACTGCTACTCAAGGGTCTGTGGTCTTAATCAGGATAATGATGAAGCCGGTTTTGAGAAGGGAGGAAAAGGAAGGAGGAAAGAGTGTTTGTGCTTCAGAAAGGATGAATCCGAGACCTTTTCCGAGAATGTCGAACAATATGATCTTGTCCCATTGGATACCCAAGTGGCCTTTGATTTAGATGAGCTTCTCAAAGCTTCAGCTTTTGTTTTGGGAAAGAGTGGAATAGGCATTGTCTACAAAGTGGTGCTTGATGATGGGCTTACTTTAGCTGTGAGAAGATTGGGGGAAGGTGGTTCTCAAAGGTTTAAAGAATTCCAGACAGAAGTGGAAGCGATCGGAAAATTAAGGCACCCTAACATTGTTACCCTTAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATCTATGATTATATACCCAATGGAAGCCTTGCTACAGCAATTCATGGGAAGGCTGGACTTGTTGCATTCACGCCTCTGTCTTGGTCAATGCGGCTGAAAATCATGAAAGGGATTGCGAAAGGATTGGTCTACCTGCACGAGTTCAGCCCTAAAAAATATGTCCATGGAGATCTAAAGCCAAGTAACATATTGCTTGGGCATAACATGGAACCCCACATTTCTGATTTTGGACTTGGAAGACTTGCAAATATTGCTGGAGGGTCTCCAACCATGCAATCCAATCGAGTCGCTGCTGAGAAACCCCATGAAAGACAAAAGAGCTTATCTGCATCAGAAGTCGCAACTAATGTTTTGGGAACTGGTTATCAGGCTCCAGAAGCACTGAAAGTGGTGAAGCCATCACAAAAGTGGGATGTTTATTCATATGGTGTGATTTTACTGGAGATGATTACAGGAAGATTGCCCATTGTCCAAGTAGGTAACTCAGAAATGGACCTTGTCCAGTGGATTCAGTTCTGCATTGAGGAAAAGAAGCCACTCTCAGATGTGATAGACCCATATTTGCCAGAAGATGCAGATAAGGAAGAGGAGATTATTGCCGTTTTGAAGATTGCAATAGCTTGTGTCCATAGCAGCCCCGAGAAGAGACCGACAATGAGGCATGTTCTTGATGCTTTGGATAGGTTGTCCATTTCTTCTGACTGA 2133 0.4327 MLPLVSLLLLLCNHLSPVTSLNAEGSVLLALKQSITDPEGSMSNWNSSDETPCSWNGVTCKEQIVVSISIPKRKLYGFLPSSLGSLSQLRHVNFRNNKLFGRLPPELFEAQGLQSLVLYGNSFSGSVPKEIGKLRYLQTLDLSQNFFNGSLPAAIVQCKRLKTLVLSRNNFTGPLPDRFGTDLFSLEKLDLSFNYLNGSIPSGMGNLSNLQGTVDLSHNHFSGSIPPSLGNLPEKVYIDLTFNNLSGAIPQNGALMNRGPTAFIGNPGLCGPPLKNACSSETPGASSPSSFPFLPDNYPPQDSDNAFRRSEKTKGLSKGAIIGIVVGDIVGICLLGLLFSYCYSRVCGLNQDNDEAGFEKGGKGRRKECLCFRKDESETFSENVEQYDLVPLDTQVAFDLDELLKASAFVLGKSGIGIVYKVVLDDGLTLAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIVTLRAYYWSVDEKLLIYDYIPNGSLATAIHGKAGLVAFTPLSWSMRLKIMKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHISDFGLGRLANIAGGSPTMQSNRVAAEKPHERQKSLSASEVATNVLGTGYQAPEALKVVKPSQKWDVYSYGVILLEMITGRLPIVQVGNSEMDLVQWIQFCIEEKKPLSDVIDPYLPEDADKEEEIIAVLKIAIACVHSSPEKRPTMRHVLDALDRLSISSD 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1711 710 Gene3D Ribonuclease Inhibitor 75 281 IPR032675 -
Dere13g1711 710 Gene3D Ribonuclease Inhibitor 14 74 IPR032675 -
Dere13g1711 710 Gene3D Transferase(Phosphotransferase) domain 1 481 709 - -
Dere13g1711 710 Pfam Protein kinase domain 411 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1711 710 SUPERFAMILY L domain-like 23 275 - -
Dere13g1711 710 Pfam Leucine rich repeat N-terminal domain 22 60 IPR013210 -
Dere13g1711 710 SMART LRR_typ_2 134 158 IPR003591 -
Dere13g1711 710 SMART LRR_typ_2 86 110 IPR003591 -
Dere13g1711 710 SMART LRR_typ_2 183 207 IPR003591 -
Dere13g1711 710 CDD STKc_IRAK 411 705 - -
Dere13g1711 710 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 74 704 - -
Dere13g1711 710 FunFam Leucine-rich repeat receptor-like protein kinase 388 480 - -
Dere13g1711 710 Gene3D Phosphorylase Kinase; domain 1 374 480 - -
Dere13g1711 710 SMART serkin_6 410 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1711 710 MobiDBLite consensus disorder prediction 280 307 - -
Dere13g1711 710 ProSiteProfiles Protein kinase domain profile. 405 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1711 710 SUPERFAMILY Protein kinase-like (PK-like) 410 702 IPR011009 -
Dere13g1711 710 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 21 181 - -
Dere13g1711 710 FunFam Leucine-rich repeat receptor-like protein kinase 185 280 - -
Dere13g1711 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Dere13g1711 710 FunFam Leucine-rich repeat protein kinase family protein 481 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1711 Dere-ChrDere13 23134277 23136576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1711 4 710 Receptor kinase-like Gene Family AT2G01210 69.972 0.0 1018
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere13g1711 Pkinase 1.8e-35 CL0016