Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1698 ATGAGTAGCAATGGGCAATCGTCCGACAGTCAGAACATCAGAGACTTAATCTCCAACGCCGGTGCTGGTGCTGCCGCTGGGGCAATAGCGGCTACATTTGTATGCCCATTGGATGTGATCAAAACTAGACTACAAGTTCATGGTCTTCCCCCTGGACAGAAAGGTAGTGTTATCGTCACGAGCTTGCAGAATTTAGTAAGAACTGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCACCAACAATACTAGCATTACTTCCAAACTGGGCAGTTTACTTCACAGTTTATGAGCAGCTAAAAGGCTTGCTTCGTTCACGTGATGGTTGCTACCAACTTACAACTGGTGAAAATATGATAGCTGCTGCTGGTGCTGGGGCAGCCACGGCAATTTCAACAAACCCATTGTGGGTTGTTAAGACCAGACTCCAAACACAGGGAATGCGGCCTGATGTTGTCCCATACAAAAGTGTTCTTTCTGCTTTGATAAGAATTACCCATGAGGAAGGCCTGCGAGGACTATATAGTGGCATTGTGCCTTCATTGGCTGGCATAAGTCATGTTGCAATACAATTCCCATCATACGAAAAGATCAAGTCATATATCGCCAAAAAGGAAAACACAACCGTTGACAAGTTAAGTCCTGGAAATGTTGCCATTGCATCTTCAATTTCCAAAGTATTTGCCTCTGTAATGACTTATCCTCATGAGGTGATACGATCCAGGCTGCAGGAGCAAGGACAGGCCAAAAATATCAAGGTCCAATATGCAGGGGTTGTTGATTGTACTAGGAAGGTGTTCCAAAAAGAAGGCCTTACGGGCTTTTATCGCGGTTGTGTTACCAATCTATTACGAACAACTCCATCAGCTGTTATTACATTCACCAGTTATGAGATGATATACAGGTTCTTCCATCGGGTTGTACCTCAGGATAAGGGGTTTCCACAAGGCTATCCTAAATCCAATGACTTTAAGAAGCCCAAGCCAGAAGACAGTGACATAAACTTTAAAAAAGGCCCCGTGTTATGA 1026 0.4435 MSSNGQSSDSQNIRDLISNAGAGAAAGAIAATFVCPLDVIKTRLQVHGLPPGQKGSVIVTSLQNLVRTEGFRGMYRGLSPTILALLPNWAVYFTVYEQLKGLLRSRDGCYQLTTGENMIAAAGAGAATAISTNPLWVVKTRLQTQGMRPDVVPYKSVLSALIRITHEEGLRGLYSGIVPSLAGISHVAIQFPSYEKIKSYIAKKENTTVDKLSPGNVAIASSISKVFASVMTYPHEVIRSRLQEQGQAKNIKVQYAGVVDCTRKVFQKEGLTGFYRGCVTNLLRTTPSAVITFTSYEMIYRFFHRVVPQDKGFPQGYPKSNDFKKPKPEDSDINFKKGPVL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1698 341 SUPERFAMILY Mitochondrial carrier 15 298 IPR023395 -
Dere13g1698 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
Dere13g1698 341 Gene3D Mitochondrial carrier domain 2 108 IPR023395 -
Dere13g1698 341 Gene3D Mitochondrial carrier domain 109 310 IPR023395 -
Dere13g1698 341 Pfam Mitochondrial carrier protein 112 204 IPR018108 -
Dere13g1698 341 Pfam Mitochondrial carrier protein 17 104 IPR018108 -
Dere13g1698 341 Pfam Mitochondrial carrier protein 212 304 IPR018108 -
Dere13g1698 341 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 16 308 IPR044712 GO:0006862|GO:0055085
Dere13g1698 341 PRINTS Mitochondrial carrier protein signature 19 32 IPR002067 GO:0055085
Dere13g1698 341 PRINTS Mitochondrial carrier protein signature 32 46 IPR002067 GO:0055085
Dere13g1698 341 PRINTS Mitochondrial carrier protein signature 221 243 IPR002067 GO:0055085
Dere13g1698 341 PRINTS Mitochondrial carrier protein signature 77 97 IPR002067 GO:0055085
Dere13g1698 341 PRINTS Mitochondrial carrier protein signature 127 145 IPR002067 GO:0055085
Dere13g1698 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 302 IPR018108 -
Dere13g1698 341 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 15 303 - -
Dere13g1698 341 MobiDBLite consensus disorder prediction 313 341 - -
Dere13g1698 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 102 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1698 Dere-ChrDere13 23002391 23006957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1698 1 337 Chloroplast and Mitochondria Gene Families AT1G25380 65.418 5.70e-150 425