Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1696 ATGGCCTCTGGTGAAGGGAGGCGGCGTCATCATGATCTTGTGCCTCTTGCTGCATTGTTAAGCCGAGAGATGAAGAGTGAGAAGATGGAGAAGCCCACTGTGAGGTATGGGCATGCTGCTCAGTCTAAGAAAGGGGAGGATTACTTTCTAATTAAGACCGACTGTCAGCGAGTACCTGGGAATCCCTCGTCAGCATTTTCTGTGTTCGCAATCTTTGATGGACACAACGGAAATGCTGCAGCCATTTTCAGCAGGGAGAATTTGTTAAATCATGTGTTGAGCGCGGTTCCTCGAGGTCTTGGACGGGACGAGTGGCTTCAAGCCTTACCTCGGGCCTTGGTTGCTGGGTTTGTGAAGACTGACAAGGAATTCCAGAGCAGAGGAGAAACATCTGGAACCACAGCTACATTCGTGATAGTTGATAGATGGACTGTAACAGTTGCATCTGTTGGCGATTCCCGTTGTATATTGGACACTCAGGGTGGAGCTGTTACAAACTTAACTGTTGATCATCGGCTTGAAGAGAATATTGAAGAGAGGGAACGTGTTACAGCTAGTGGAGGTGAAGTTGGGAGGCTGAGCATTGTTGGTGGTGCAGAGATTGGTCCCCTCCGTTGTTGGCCAGGTGGTTTATGCCTTTCTAGGTCTATAGGAGACATGGATGTTGGAGAGTTTATAGTTCCAATACCATATGTCAAACAAGTCAAGCTATCAAATGCTGGTGGGAGGCTCATCATTGCTTCTGATGGCATCTGGGATGCTTTATCCTCAGACATGGCTGCAAAATCTTGTAGGGGTTTGCCTGCTGAACTTGCTGCTAGGCAGGTTGTCAAGGAAGCACTAAGAACAAGAGGGTTAAAGGATGACACAACTTGCATAGTAGTTGACGTAATTCCACCGGATAATGCATCGCCACCCCCACCTCCCCCCAAAAAGCAGAACAAGTTGAGGGCTCTACTTTTCAGGAAGAGGTCTCGTGATGCGGCTGGTAAGCTGTCAAAGAAGCTTTCAGCTATAAATATAGTGGAGGAACTGTTCGAAGAAGGATCGGCTATGCTTGCTGAAAGACTGGGGAATGATGACAACGCAGGGCAATCAACCTCCGGTCTCTTTGTCTGCGCCGTGTGCCAAGTTGATCTTGCTCCTAGCGAGGGCATCTCTGTTCATGCTGGTTCCATCTTCTCCACCAGCTCGAAGCCATGGCAAGGTCCTTTTCTATGTGCTGATTGTCGCGATAAGAAGGATGCCATGGAGGGGAAACGTTTTAGTGGAGTCAAAGTGTCATAG 1287 0.4848 MASGEGRRRHHDLVPLAALLSREMKSEKMEKPTVRYGHAAQSKKGEDYFLIKTDCQRVPGNPSSAFSVFAIFDGHNGNAAAIFSRENLLNHVLSAVPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTNLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAARQVVKEALRTRGLKDDTTCIVVDVIPPDNASPPPPPPKKQNKLRALLFRKRSRDAAGKLSKKLSAINIVEELFEEGSAMLAERLGNDDNAGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRDKKDAMEGKRFSGVKVS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1696 428 Gene3D - 33 302 IPR036457 -
Dere13g1696 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Dere13g1696 428 SUPERFAMILY PP2C-like 33 297 IPR036457 -
Dere13g1696 428 PANTHER PROTEIN PHOSPHATASE 35 296 IPR015655 GO:0004722|GO:0006470
Dere13g1696 428 CDD PP2Cc 36 297 IPR001932 -
Dere13g1696 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Dere13g1696 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Dere13g1696 428 SMART PP2C_4 27 295 IPR001932 -
Dere13g1696 428 Pfam Protein phosphatase 2C 61 282 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1696 Dere-ChrDere13 22975238 22978390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1696 1 427 PP2C-type Phosphatase Gene Family AT1G68410 80.046 0.0 707