Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1689 ATGGAGGATCCAATTGAATACCAAACCAAAAGAACTAACTCCACTACTCCCACCACGCGCTTAAAGCTCTTCGGCTTCAGTGTTCACGAAGACACAGAAGATGAACTGCTTGAAGATGTATCAGATTCCATAGCCAAACCCATTTCCCCGTCTGGATCGCCGGATTCCGGCGAAGGAGGCTGCGGTGGAGGAGGAGCTGCTGGTGGTGCGTTCCCTCCCTCCTCCGGTGACCGGAAATACGAGTGTCAATATTGTTGCCGTGAGTTTGCGAATTCTCAAGCGCTTGGAGGGCACCAGAACGCGCACAAGAAGGAGCGTCAGCAGCTAAAGCGGGCGCAGTTACAAGCCACGCGCAACGCCGCCGTTTCGTTCGTGCGGAACCCCATAATCTCCGCCTTCGCCCCTCCGCCGCACCTCCTGGCTCCGTCAGGGCCCGTGGTGGTTCCGGCGCCTCCGCCATCGTGGGTCTACGTGCCGCCTCGTGCCGCGCCGTCTCCGTTCCACGTGTCAGTGTCGCACGGTTGTGTGTTTCCGTCGTCGCCGAATAACGCTGTGAATTATAACAGTACCAATGGGGGTATTACGGGAGGGAGATCTGCGGGTGCAGGGATGGTACCCTATGGCGGCGGTGCAGGGGATTCGTCATCTGCATTGTCGTCCGTGGGGTCGCAACTACTGGCTCGGGTCAACGGGCGGGTTGATGGGCCTTCCTTGAGTAGGTTCTCCAAGGGGGATGTTGGGCCCAATTTCGATGAAGCATTGGGCTTGGACTTGCATCTTAGCCTTGCACCGGCTGCGCCATGA 804 0.5821 MEDPIEYQTKRTNSTTPTTRLKLFGFSVHEDTEDELLEDVSDSIAKPISPSGSPDSGEGGCGGGGAAGGAFPPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFAPPPHLLAPSGPVVVPAPPPSWVYVPPRAAPSPFHVSVSHGCVFPSSPNNAVNYNSTNGGITGGRSAGAGMVPYGGGAGDSSSALSSVGSQLLARVNGRVDGPSLSRFSKGDVGPNFDEALGLDLHLSLAPAAP 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1689 267 PANTHER ZINC FINGER PROTEIN 5 10 266 IPR044299 GO:0010090
Dere13g1689 267 FunFam Zinc finger protein GIS3 67 130 - -
Dere13g1689 267 ProSiteProfiles Zinc finger C2H2 type domain profile. 80 107 IPR013087 -
Dere13g1689 267 SUPERFAMILY beta-beta-alpha zinc fingers 76 107 IPR036236 -
Dere13g1689 267 MobiDBLite consensus disorder prediction 40 65 - -
Dere13g1689 267 ProSitePatterns Zinc finger C2H2 type domain signature. 82 102 IPR013087 -
Dere13g1689 267 Gene3D Classic Zinc Finger 72 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1689 Dere-ChrDere13 22884022 22884825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1689 13 265 C2H2 Transcription Factor Family AT1G68360 51.119 1.52e-58 185