Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1679 ATGACACTTTCTTTTTTCTCAATAGCTCATTCCCACCATTGCTCTTCTCCCATTAAATTTCAGGATTCTTCTTCGCTTACCCTTTTCCCTCCCACGCCTTTTTCTTCCCGCAGACCTCGCTGGCCGCGAATGGACGCTGCCTGTAACTACCACCGCCGCCGCCGGAAAGACAAGGTGGTTGTCATAATGGGAGCCACAGGCACCGGGAAGTCTCGCCTCTCCATCGAACTTGCCACCCGTTGCGCCTGCTCCGAAATAATCAACTCCGACAAAATGCAAGTCTACAGAGGCCTTGACATCACCACCAACAAGATCCCCGTGGGCGAACGCAACGGCATCCCTCACCACCTCCTCGGAGACGTGGACCCCGCGAACGGAGAGTTCTTGCCGTTGGATTTTCGCTTCAGCGCGGGGTCGGTTATCTCCGATATCAGCTCGAGGAGGAAGCTTCCTATCGTCGTCGGTGGGTCCAACTCGTTGATTCACGCTCTCCTGGTGGACCGGTTTGACCCGGCGTTGAATGTGTTCGATGAAGGCTCGTCGTCGAGCTCGATCTCGTCCGAGTTGAGATACAACTGCTGCTTCTTCTGGGTGGACGTGTCGTTCCCTGTTCTATCAGATTATTTGCTGAAGCGAGTGGATGACATGCTCGACTCGGGAATGGTCGACGAGTTGGCTCAGTTCTTCGACCCAGAAGCGAGTGACTTAGACAAAGACACGGAGCCCCGGGTTGGGTTGAGGAAAGCCATCGGAGTGCCCGAATTCGATCGTTATTTTAAGAGATACCCTCCGCTGGGTGGGCTGAGGCGAGGAGAGGATCGGGTGCAGGAGGCCGCATACGAGGAGGCAGTGAGGGCCATAAAGGACAATACGTGTCAGCTAGCAAAAAGGCAGATAGGGAAGATCTGGCGGCTAAAAGGTGCAGGGTGGGACCTACGGAGACTAGACGCTACAGAGGCGTTTCGAGCGGCAATGACGTCGTCGGGATGTTCCGGCGACGGCGAGAGGTGGTCGGACATTTGGGAGAAACAGGTGGCCGAACCAAGCGTGAAGATTGTGAAGCGGTTCTTCAAGGAGTAG 1080 0.5537 MTLSFFSIAHSHHCSSPIKFQDSSSLTLFPPTPFSSRRPRWPRMDAACNYHRRRRKDKVVVIMGATGTGKSRLSIELATRCACSEIINSDKMQVYRGLDITTNKIPVGERNGIPHHLLGDVDPANGEFLPLDFRFSAGSVISDISSRRKLPIVVGGSNSLIHALLVDRFDPALNVFDEGSSSSSISSELRYNCCFFWVDVSFPVLSDYLLKRVDDMLDSGMVDELAQFFDPEASDLDKDTEPRVGLRKAIGVPEFDRYFKRYPPLGGLRRGEDRVQEAAYEEAVRAIKDNTCQLAKRQIGKIWRLKGAGWDLRRLDATEAFRAAMTSSGCSGDGERWSDIWEKQVAEPSVKIVKRFFKE 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1679 359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 237 IPR027417 -
Dere13g1679 359 Gene3D - 56 356 IPR027417 -
Dere13g1679 359 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 56 356 IPR039657 -
Dere13g1679 359 FunFam Adenylate isopentenyltransferase 202 312 - -
Dere13g1679 359 Pfam IPP transferase 93 167 - -
Dere13g1679 359 Pfam IPP transferase 179 299 - -
Dere13g1679 359 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 202 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1679 Dere-ChrDere13 22682759 22683838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1679 190 358 C2H2 Transcription Factor Family AT2G27760 27.225 1.60e-11 63.5