Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1674 ATGCTAGGAGGAAACCCATTAGACCTCAACAACTTGCCTGGGGATTACTCTAGAGATGAGAGCAGAGAAAAGAAAAGGAAGGTGTACGAGTGTAGATTTTGCTCCCATAAGTTCTGCAAATCTCAAGCTCTTGGGGGACACATGAACCGCCACCGCCAAGAAAGAGAAACAGAGACGCTGAGTTATGCTCGCCAGCTCGTGTTCCGTTACCATCATAAGCTACCCCCTCAAGCTTCCCCCCACCTTGGGACCCGTTTATTTTCCAGTGAGCACGCAGCAGCAATATGGCCACCACAACCTAAACTAGGGTTCAGCTGGTTTTGGTTGGAGCTGGGTATGGTGGAATTGGAAGGAAGGATTTTGTTATGTTCGGTGTACTATATATTAACTGTTCAAAGAGGAACTAGTGATGGATATTACAAAGTTTGCATGAGCGATGATGTTATGAATTTGGGTTTAACATAA 465 0.4538 MLGGNPLDLNNLPGDYSRDESREKKRKVYECRFCSHKFCKSQALGGHMNRHRQERETETLSYARQLVFRYHHKLPPQASPHLGTRLFSSEHAAAIWPPQPKLGFSWFWLELGMVELEGRILLCSVYYILTVQRGTSDGYYKVCMSDDVMNLGLT 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1674 154 MobiDBLite consensus disorder prediction 1 21 - -
Dere13g1674 154 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 56 IPR013087 -
Dere13g1674 154 FunFam Zinc finger protein STAMENLESS 1 10 76 - -
Dere13g1674 154 Gene3D Classic Zinc Finger 15 78 - -
Dere13g1674 154 PANTHER ZINC FINGER PROTEIN JAGGED 23 87 IPR045320 GO:0003700
Dere13g1674 154 ProSitePatterns Zinc finger C2H2 type domain signature. 31 51 IPR013087 -
Dere13g1674 154 SUPERFAMILY beta-beta-alpha zinc fingers 26 57 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1674 Dere-ChrDere13 22635853 22637089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1674 5 83 C2H2 Transcription Factor Family AT1G13400 53.922 4.38e-24 91.3