Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1669 ATGAGACTGAGCTGCAATGGGTGCCGCATTCTCCGAAAAGGTTGCAGCGATAACTGCAGCATCAGACCCTGCCTCCAATGGATCATCTCTCCTGAATCCCAAGCCAACGCCACCCTCTTCCTCGCCAAATTCTACGGCCGCGCTGGCCTGCTCAACCTCATCAATGCCGCCCCACCCCACCTTCGCCCAGCCGTGTTCAAGTCGCTGTTGTACGAATCGTGTGGGAGGATTGTGAATCCGGTATACGGGTCGATGGGTTTGTTCTGGACGGGGGAGTGGGACCGGTGCCAGGCTGCCGTGGATGCGGTGATGATGGGGTCGGAGATCAGCGGCGGCGCGGCGGTTTCCGATTGGCGGGGGAGTGATCATGGGTTTTTCGCTGCTTGTGATATACGTCACGTGGCGAAGGAAGGGCAGGTGGAGAAGGAGAAGGAGAACGATAAAGAAAAAGAGAAGAAGAGCGAGGTGCACAAGTTGAAAGGGAGAGCGCGGTTCAAGAGGAATACGAAAGTAATAAAGCCGAAAGCCCGAGTGGGTTGGGTGGACTCGTCTGCACTGTGGAAGCCGATTCAGGACTTGTCAGAGAGCGAGAGCGTCTTCTCCGGGGAAACCGTGGAGCCTAGCTTGGTGAACCGGGTTGAGCCGAACAGGGAGCGTGTGAAGAATGCAGGTGGTGAAGCGAACCGGGCCGGAGAAACGGAAGTGAATTTGAATTTGAGTCTGGGTAAAGCTTAA 735 0.5619 MRLSCNGCRILRKGCSDNCSIRPCLQWIISPESQANATLFLAKFYGRAGLLNLINAAPPHLRPAVFKSLLYESCGRIVNPVYGSMGLFWTGEWDRCQAAVDAVMMGSEISGGAAVSDWRGSDHGFFAACDIRHVAKEGQVEKEKENDKEKEKKSEVHKLKGRARFKRNTKVIKPKARVGWVDSSALWKPIQDLSESESVFSGETVEPSLVNRVEPNRERVKNAGGEANRAGETEVNLNLSLGKA 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1669 244 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Dere13g1669 244 Pfam Lateral organ boundaries (LOB) domain 4 104 IPR004883 -
Dere13g1669 244 MobiDBLite consensus disorder prediction 196 244 - -
Dere13g1669 244 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1669 Dere-ChrDere13 22581770 22582609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1669 1 154 AS2 family AT1G67100 61.935 2.93e-66 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere13g1669 LOB 2.6e-23 No_clan