Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1611 ATGGCTTCGCCTATTTCTTTCCTCTTGTTCGCTAGAATTTCAGGCCTTGCGGTCGCACTTCTTGTCTTTTTCTGGGTCCTTGCCTTCACCTCCAGCTTCCTCCCTCCCTCGCTCTCAGAGCCCCGCCTTCTCTATTCAGTTCTGCATCCTCTGTTGATGGTAATTGGGTTCATTCTGATAGCCGGAGAAGCAATCTTGGTTCACGGATGGCTTCCTGGGTCGAGAGGGTTGAAGAAGATTGTGCATCTGTGGCTTCAAGGGGTGGCTTTGGGGTGTGGCATCTTTGGGATTTGGACTAAATTTCTTGGAAAGAATGGGATTCTGGCCAATTTCTATAGCCTGCATTCATGGATGGGTTTGATTTGCATCTTCCTTTTTGGAGCTCAGTGGATGATGGGGTTCTGGAGCTTCTGGCACAGAGGAGAAGGGAGGAGGGTGAGGACAATAATACTGCCATGGCATGTCTTTATTGGTCTCTTCACTTATGGTCTGGCTGTAGCTACTGCAGAAACTGGACTAGTGGAGAAGCTCACTTTCTTGCAAACAAGAACAAATTCATCCAAACACAGCGCAGAGTCAATGGTGGTTAATAGCTTAGGTCTTGGCCTTGCCCTTCTCAGTTCCTTTGTTATTTTGGCTGCTCTTTCACCCAAGTACCAACCCCTCCAATCCAAACCCTATGTCCACTCTCATCCTGCCAAACTCATTAGCAGCTTAAACTTTGAAAGAGATGAGTGTGGAAAGCCGAATCCGAATCCGGGAGGGAAAAAGAAATCTCGAGAAAGTAGCTTAGAGAATAGTACTACTACTTTCGATTCTCTTTGGTGCTCCGTTTTGATTCCTGTTTCGTTTGACAGTCATTCGAAAGTTACTCAGAAACGTAGTTCCAGAATCCGCCCATGTCTGCACTCTGATCGCATCGCCAAAACCCTAACCCTAATTCTGGTTTTTGTTTCCTTTTCTGAAGAAATGTGCTCTGCTACTTCATCTCCTTCCTTCCTCTTCCTTCCCACCGAGACACCCTCTCTTCTGAAACGCAGCAACAGCCCCATGAACCTTCCAAGACCATTCCTCTGCTACCTCCGACCCACAATTGCCAGACGCAATATCTCCGCTTCAATCGCGGAGACGAATTTTGGGCTCTCGTGGGTTTCTCCAAATCAGAATCCAAGCGACGATTTTGGTGGTTGGGCTTTTGTTGAGTATCCGGTCCCGCAGATAAGGAAGAGAGCACTGCCTTCATATGTGATAGTTGGCATTGGTTCTTCACTGGTTCTTCTGGCTACTGTCATCGCTAGCTTCTCACTATCGAGAAAAGATTTTAAGATTCAATTTGGAGGCCCATTGCAAGTTTTGCATGGAATTTTAAGCCCTATCAAAGATCGAGGTGATCAAAACAAAACTGCAGAGGTTGACACATCGAAAGAGAACAAGTTGATCTCCGAGGAGACCCGTGAAACCGTGCCTGTGCCTATTACAGAAACGGTTACATCTGCGGCTGTAGACAAGCCAGAACGTATTATAATTCCAGTTTTTGTGGATTCTACACAAGAAGAAGCATTGTCACTGTTGAAGATGCTGAAGATAATTGAAGAAGAAGTGGAAGCTAATGAATTGTGCACCAGAAGGGAATTTGCAAGATGGCTAGTTAAATTGAATTCTTTTCTGGAACGGAATCCAAAACACAGGATTGCACCGATAGTTTCACTCTCTGGGTCAGTACTTACTGCTTTTGATGATATCAGGGTTGATGATCCAGATTTTATGGCCATTCAAGCCTTAGCAGAAGCTGGTGTGATCCCCAGCAAATTACATTCAAAGAGTTGGTCTAAATCTGGTGGACCTGAAGGTCAAGAAAACATAAAATTCTTTCCTGATAGATTCATTTCACGACAAGATTTAATAGACTGGAGAGCTCAATTTGAGTATGAGTTTTCCCCTGAAGTACTTGACCAGATATCAAATAAAAAAGTGAGCTTTATGGATGTGAAGGAGATCAGTTCTTATGTGTCACCAGCACTTTATGTAGACATGTTGGCAGGGGATAGGAGCTTACTCAGAAGAGTTTTTGGACAGAGCAAGCGGTTTCAGCCAAACAAACCTTCAACTAAGGCACAGGCAGCAGTAGCTCTGACAAGTGGCAGTATGAAGGAGGCAATTTCTACTGAATTGTCAAGAAGAGAAGCTGAGAGTTCTGCTAGACAAGCTGAGGCAGAAGAGATTAAGTCTGAGTTGCTTAGAAGAGGAGACATACAGAAATTTTGGGATGAAAAGCTTAATGAAGAAAAACTTCGTGGTTCTGATGTAGAGAGGCGTTATCTTGATGCATTAAAGAATTTGGAAGAAGAGAAGGTTAATTTAGATAAGATGTACGCTGACTTTTTAAAAGAAAAGGCAGCAATGGATTGTCAGAGGCAGCTGCTACTCAGTTTAAAGGAAGAGGTTGATGAAATGTCAGAAATGCTTTTGTCTGAGAGGGTTTCCTATCTAGATGAAAAGCACATTGTACAGCAGTTGCTCAAAGATTTGGAGTCCAAGCATGAAGAAATGCTTGACAAAAAATCAACACTGGAAGCTGAGAAAGAAGCTCTTCAGATTATGCGATCATGGGTGGAGGACGAGGCAAGAAGAAGCCAAGCTCGGGCGGCTGTTCTAGAAGAGGTAGGGCAAAGATGGAATGGAACAACCAAGCTTGAATAG 2700 0.4407 MASPISFLLFARISGLAVALLVFFWVLAFTSSFLPPSLSEPRLLYSVLHPLLMVIGFILIAGEAILVHGWLPGSRGLKKIVHLWLQGVALGCGIFGIWTKFLGKNGILANFYSLHSWMGLICIFLFGAQWMMGFWSFWHRGEGRRVRTIILPWHVFIGLFTYGLAVATAETGLVEKLTFLQTRTNSSKHSAESMVVNSLGLGLALLSSFVILAALSPKYQPLQSKPYVHSHPAKLISSLNFERDECGKPNPNPGGKKKSRESSLENSTTTFDSLWCSVLIPVSFDSHSKVTQKRSSRIRPCLHSDRIAKTLTLILVFVSFSEEMCSATSSPSFLFLPTETPSLLKRSNSPMNLPRPFLCYLRPTIARRNISASIAETNFGLSWVSPNQNPSDDFGGWAFVEYPVPQIRKRALPSYVIVGIGSSLVLLATVIASFSLSRKDFKIQFGGPLQVLHGILSPIKDRGDQNKTAEVDTSKENKLISEETRETVPVPITETVTSAAVDKPERIIIPVFVDSTQEEALSLLKMLKIIEEEVEANELCTRREFARWLVKLNSFLERNPKHRIAPIVSLSGSVLTAFDDIRVDDPDFMAIQALAEAGVIPSKLHSKSWSKSGGPEGQENIKFFPDRFISRQDLIDWRAQFEYEFSPEVLDQISNKKVSFMDVKEISSYVSPALYVDMLAGDRSLLRRVFGQSKRFQPNKPSTKAQAAVALTSGSMKEAISTELSRREAESSARQAEAEEIKSELLRRGDIQKFWDEKLNEEKLRGSDVERRYLDALKNLEEEKVNLDKMYADFLKEKAAMDCQRQLLLSLKEEVDEMSEMLLSERVSYLDEKHIVQQLLKDLESKHEEMLDKKSTLEAEKEALQIMRSWVEDEARRSQARAAVLEEVGQRWNGTTKLE 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1611 899 Coils Coil 801 821 - -
Dere13g1611 899 Pfam Eukaryotic cytochrome b561 48 179 IPR006593 -
Dere13g1611 899 SMART 561_7 48 173 IPR006593 -
Dere13g1611 899 MobiDBLite consensus disorder prediction 242 263 - -
Dere13g1611 899 Gene3D - 1 223 - -
Dere13g1611 899 ProSiteProfiles Cytochrome b561 domain profile. 10 215 IPR006593 -
Dere13g1611 899 MobiDBLite consensus disorder prediction 249 263 - -
Dere13g1611 899 Coils Coil 770 797 - -
Dere13g1611 899 Coils Coil 513 533 - -
Dere13g1611 899 FunFam Cytochrome b reductase 1 2 224 - -
Dere13g1611 899 CDD Cyt_b561_ACYB-1_like 43 181 - -
Dere13g1611 899 Coils Coil 833 867 - -
Dere13g1611 899 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 466 894 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1611 Dere-ChrDere13 21929372 21939130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1611 3 246 Chloroplast and Mitochondria Gene Families AT1G26100 61.066 1.75e-84 269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1611 13 21929372 21939130 Dere13g1611 13 21929372 21939130 ECH