Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1571 ATGGTTCCAAGTGACATCAGAGGATTCCACTATCCAGCACCTGAAAACCCCATCCTAGTTCCTCCCAACTATGGCTTGTTTCAGTATAGTGACATCCCAAACCAGATTCACCTAAACACCCTCTTAGGCAATTTACCAAACTGCTACTTCCCTTCTGCTTCAGGAAGCCATGAGTTTATCCCTCCTCTTCCTCCTACTTCCTCATGCTGCCTCAGCAGCAATTCAACTTCTGATGAAGCTGACGAGCTTCAGCTCAGCATCATCGACGAAAGGAAGCAGCGGCGAATGATATCGAACCGAGAGTCTGCCCGCAGGTCCAGGATGAGGAAGCAAAAGCACTTGGATGAGCTATGGTCACAGGTGGTGAGACTCAGGAATGAGAATCACAACCTCATTGACAAACTGAACCATGTCTCTGAGTCCCATGACAGAGTTCTTCAGGAGAATGCACGCCTCAAGGAAGAAGCTTCTGATCTTCGCCAACTGCTAGCTGACCTGAAGATTGGCACTTCTTTTGCTGATGCCATGAGAGATTTTGATGAACTCAGAGCTGAGTTCTCAAACTAA 567 0.4762 MVPSDIRGFHYPAPENPILVPPNYGLFQYSDIPNQIHLNTLLGNLPNCYFPSASGSHEFIPPLPPTSSCCLSSNSTSDEADELQLSIIDERKQRRMISNRESARRSRMRKQKHLDELWSQVVRLRNENHNLIDKLNHVSESHDRVLQENARLKEEASDLRQLLADLKIGTSFADAMRDFDELRAEFSN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1571 188 CDD bZIP_plant_GBF1 92 143 IPR045314 GO:0003700|GO:0006355
Dere13g1571 188 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 172 IPR044521 -
Dere13g1571 188 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 94 109 IPR004827 GO:0003700|GO:0006355
Dere13g1571 188 SMART brlzneu 87 151 IPR004827 GO:0003700|GO:0006355
Dere13g1571 188 FunFam BZIP transcription factor 89 140 - -
Dere13g1571 188 SUPERFAMILY Leucine zipper domain 91 141 IPR046347 GO:0003700|GO:0006355
Dere13g1571 188 Pfam bZIP transcription factor 91 149 IPR004827 GO:0003700|GO:0006355
Dere13g1571 188 Gene3D - 89 144 - -
Dere13g1571 188 Coils Coil 135 169 - -
Dere13g1571 188 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 89 152 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1571 Dere-ChrDere13 21448122 21448688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1571 65 173 bZIP Transcription Factor Family AT3G30530 67.568 4.91e-46 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere13g1571 bZIP_1 4.5e-13 CL0018