Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1559 ATGGAGCAGGACCACGTTCTAACTCTAATTGGGTCGTCAGAAACAACTGTCAAACAAATTGAAGATGCTTTCAAAGAGTTCAGAACAAGGAAGGATATTCAAGTTGTGTTGATAAGCCAATATGTAAACAGCCACCACAATTTGTTGCTCTTTTTCAGCCTGTCGTGTTCCTTAAGGGAGGTTTTAGCTCTTGTTACAATTGATGCTATTCTTGTTCAGGTGGCGACATCTCTAAAAGTTGCTGAATTTTTGAAGGTTGAGGAGGTTTACAATTTCTCCCAAGATGATCTTTTAACGGAGGACATCCTCATACTTGACACGCATGCAGAAGTGTTTTTCTGGGTTCGTCAATCTGCGAACACCTAA 366 0.4044 MEQDHVLTLIGSSETTVKQIEDAFKEFRTRKDIQVVLISQYVNSHHNLLLFFSLSCSLREVLALVTIDAILVQVATSLKVAEFLKVEEVYNFSQDDLLTEDILILDTHAEVFFWVRQSANT 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1559 121 Pfam Gelsolin repeat 87 120 IPR007123 -
Dere13g1559 121 Gene3D Severin 71 121 IPR029006 -
Dere13g1559 121 Gene3D ATPase, V1 complex, subunit F 2 51 IPR036906 GO:0034220
Dere13g1559 121 SUPERFAMILY Actin depolymerizing proteins 83 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1559 Dere-ChrDere13 21227193 21230200 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1559 9 52 Primary Pumps ATPases(2) AT4G02620 54.545 1.98e-09 50.1