Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1521 ATGCAAAGCTTTGCCTGCCTTCATTATTGGGCTTTGCATAATTCCATTAATATATACCCACTTCCAGCAGAAGAGGGGAAAGAGAAGAAGCATCATCAAAAAGCAGCATCCATGAGGATAAATCATCAGAAGACCCAGAACGATTCAAGGAGAAAGAGGCAAGTTGTCGAGGAGCAATTGCCTTTGCTATCTAATGAGAAAGATGGGGAGGGTTCTCAGGGGGCATCTTTTACTGGGTCAGTGTTCAATTTATCTACCACCATAATTGGGGCTGGGATTATGGCCTTACCTGCTGCCATGAAAGTTCTGGGGTTAGGTCTGGGAATTGTTGCCATAGTCTTTCTTGCGTTGCTCACAGAGACGTCCTTGGAGATTCTGATAAGGTTTAGCAGAGTAGGGAAGGCTGGGACCTATGGAGAATTAATGCGGTATGCCTTTGGAAGTGCTGGAAGATGGGTTTTTCAGATATGCGTTCTTCTTAACAATTTTGGGATTCTCGTCGTCTACATGATCATAGTTGGTGACGTGCTATCTGGAACATCTTCAAGTGGAATTCATCATCATTCCGGTGTATTAGAAGGATGGTTTGGTGAATACTGGTGGACTGGGCGTACTTTTATCCTCCTTGTGGCAACCCTATTTGTATTTGCTCCATTGGCATTCTTTAAGCGGATAGATTCATTGAAATATAGTTCCGCTTTAGCTGTGGCACTGGCAATTGTATTTCTAGTCATAACAGCAGGAATAACATTTATTAAATTGTTTGGTGGCAGCATTATAAGGCCCAGAGTGCTCCCTAATGTTACTGATTTTACATCTGCATGGAAGCTCTTTACAGCAGCCCCTGTTCTTGTGACAGCATTCGTTTGTCACTACAATGTGCATACAATAGACAATGAGCTAGGAGACTCTTCCCTGATACAACATGTTGTGCGTGCATCTCTGGCTCTATGTTCTAGCATCTATATATTTACAGCCTTATTTGGGTTTCTTTTGTTTGGTGAATCAACTCTTGATGATGTGCTGGCCAACTTTGATACTGACCTTGGCATCCCTTACAGCGGCCTTCTCAATGACATTGTCCGCCTCAGCTATGCCTTCCACCTTATGCTTGTTTTCCCAGTTGTCTTCTTCTCACTGCGCTTTTATTTAGATGATCTCCTCTTTCCTTCAGCTAGGTCAATGGACTCAGATAACGTTAGGTTTGTGTCGATCACCTCTGGACTCATCTGTTTCGTGTATGTGGCTGCAAATTTTATACCTAGCATTTGGGATGCTTTCCAATTCACTGGAGCGACTGCCACTGTTTGCCTAGGGTTCATTTTTCCTGCTGCAATTGCTCTAAGGGATCCTCATGGTATTGCAACAAAGAAAGATAAGATTTTATCCGTTGTTATGATTGTGCTGGCTGTGTTTTCAAATGTGGTCGCCATATACAGTAACGCTAATGCCCTCTTCAGAAAAGATGTTGATCCTCATGAATGA 1485 0.429 MQSFACLHYWALHNSINIYPLPAEEGKEKKHHQKAASMRINHQKTQNDSRRKRQVVEEQLPLLSNEKDGEGSQGASFTGSVFNLSTTIIGAGIMALPAAMKVLGLGLGIVAIVFLALLTETSLEILIRFSRVGKAGTYGELMRYAFGSAGRWVFQICVLLNNFGILVVYMIIVGDVLSGTSSSGIHHHSGVLEGWFGEYWWTGRTFILLVATLFVFAPLAFFKRIDSLKYSSALAVALAIVFLVITAGITFIKLFGGSIIRPRVLPNVTDFTSAWKLFTAAPVLVTAFVCHYNVHTIDNELGDSSLIQHVVRASLALCSSIYIFTALFGFLLFGESTLDDVLANFDTDLGIPYSGLLNDIVRLSYAFHLMLVFPVVFFSLRFYLDDLLFPSARSMDSDNVRFVSITSGLICFVYVAANFIPSIWDAFQFTGATATVCLGFIFPAAIALRDPHGIATKKDKILSVVMIVLAVFSNVVAIYSNANALFRKDVDPHE 494
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1521 494 MobiDBLite consensus disorder prediction 27 53 - -
Dere13g1521 494 Pfam Transmembrane amino acid transporter protein 74 481 IPR013057 -
Dere13g1521 494 PANTHER AMINO ACID TRANSPORTER 68 473 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere13g1521 Dere-ChrDere13 20411838 20418489 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1521 46 494 Amino Acid or Auxin Permease AAAP Family AT3G30390 63.111 0.0 573