Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1510 ATGAGAGCAGGGAAAGGTAACCAGGAAGACGAGGAGTACGAGGAGGAAGAGTTCGTTTCTAAGAAAGAAGGCCTCTCGTCTGCGCCTAATAGCAATAATTCCAACAAAGGTGCAAAAGCTATTGATAACGCTAGTGCAAGAAGATCAAAACATTCAGTGACTGAGCAGCGGAGAAGGAGCAAAATAAACAAGAGATTGACGAATGTTGACCTTTTCCTTCAGGTAATTGAGTATGTCCAGTACTTACAGGAGAAGAGAAACAGTCACTCGCAGGTCCAAAGTTTTGTTGGCCAGCCTCAACCTGTGAATAATTGTTTGGGTCCTTTGTCACCTTTTCCGGGAAAGTTGGATGAAGGCAACCTTTGTGGCAACCAGAATATGATAGATCCTGATCAAAGCAGGGATATTGTCAGCAAAACAGCTGAGAGGCAACCTGAGTTAGCAAGCAGGGGAGTATCTTTGCCAATGCCTATGCATGGAAACATGTCCGTTCCTGTCAGAAGTGATGGTTTACCTTCCCAGCCTCTTCAGGGGCCTGTTTCTGATGCCCAATTAACTGGAAATCCAGCTATGAGTGACCTGCAAAACCAATATGATGAGCTGATAATTGAAGGAGGAACAATTAGCATCTCAACTGTGTACTCTCAAAGATTGTTGAACAATCTGACTCAAGCTCTACAGAGTGCTGGTTTAGATCTGTCACAGGCCAGCATCGCTGTTCAGATTAATGTCGGGAAGCAGGCAAACAGTGGACCAAGCTATGGGACATCCATTCCCAAGAATCATTCTGATCCCCCTTGTAGCAATCAAGCAATTTCACATGTTAGAGATGGAGGCAGTGGCGAAGACTCAAATCAAGCTCAGAAACGGTTGAAAACATAA 882 0.4456 MRAGKGNQEDEEYEEEEFVSKKEGLSSAPNSNNSNKGAKAIDNASARRSKHSVTEQRRRSKINKRLTNVDLFLQVIEYVQYLQEKRNSHSQVQSFVGQPQPVNNCLGPLSPFPGKLDEGNLCGNQNMIDPDQSRDIVSKTAERQPELASRGVSLPMPMHGNMSVPVRSDGLPSQPLQGPVSDAQLTGNPAMSDLQNQYDELIIEGGTISISTVYSQRLLNNLTQALQSAGLDLSQASIAVQINVGKQANSGPSYGTSIPKNHSDPPCSNQAISHVRDGGSGEDSNQAQKRLKT 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1510 293 MobiDBLite consensus disorder prediction 1 61 - -
Dere13g1510 293 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 46 102 IPR036638 GO:0046983
Dere13g1510 293 MobiDBLite consensus disorder prediction 24 40 - -
Dere13g1510 293 MobiDBLite consensus disorder prediction 248 293 - -
Dere13g1510 293 MobiDBLite consensus disorder prediction 248 286 - -
Dere13g1510 293 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 7 66 IPR044295 GO:0003700|GO:0006351|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1510 Dere-ChrDere13 20239155 20243494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1510 1 293 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 41.124 4.72e-62 197