Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1502 ATGGCTTTTCTTTCGGAGGTCGCCATGTCCGCGAGCTTCTCTCAGTATTACGAGGACTATGACCAACTCTTCCGAAGATTGAACCCACCCAGGGTTGTAATTGATAATGAAGCCTGCAAAAATGCCACTGTCATAAGGGTTGATAGCGCAAACAAGCACGGAATACTTCTTGAAGTCGTGCAAATCCTCACTGATCTCAACCTTATCATAACCAAGGCTTACATATCTTCTGATGGAGGATGGTTCATGGATGTTTTCAATGTCACCGACCAAGATGGAAACAAGGTTACAGAAGAATCTGTTCTGAGTTACATTCGAAAGAATCTTGGACCAGATTCTTGTTTTACATCTCCCATGAGATCAGTTGGGGTGAAGCAAAGAATGGACCACACTGCAATAGAACTAATGGGAACTGATAGGCCAGGATTACTCTCAGAAGTGAGTGCTGTTCTAACCAACCTCAAGTGCAACATAGTGGATGCAGAGGTCTGGACCCACAATACTCGTGCTGCTGCTGTGATGCACGTGACTGATGAAGAAACTGGGTCTGCTATTACTGACCCAGAAAGGCTATCTCCGATTAAGGAGCTTCTGCGTAATTTGCTTGGTTGTTGTGGCAACGAAAATGGAAGAGCCAAGACTGTGGTCACTGATGAAGTAATCCATACTGATAGAAGGCTTCATCAGATGATGTTTGCTGATAGAGATTATGAACGAGATCGTGATGATTATGATGATGATGAGTTTGATAGGAAGCGAAGGCCTATTGTGAATGTTGTTAATTGCTCTGACAAAGATTACTCTGTAGTTACCATCCAATCTAAGGATAGGCCAAAGCTTGTGTTCGACACAGTTTGTACGTTGACGGATATGCAATATGTGGTTTTCCATGCAAGTATTGATGCTGAGAGACCAGAAGCGTATCAGGAATATTACATCAGACATGTTGATGGATCCCCAGTAAATTCTGATGCAGAAAGACAGAGATTGGTACAATGTCTTGAAGCTGCCATTGAGAGGAGAGTATCAGAGGGATTGAAGCTAGAACTCTGCACAGCTGATAGAGTTGGACTACTATCCGATGTGACACGCATATTCAGAGAGAACAGCCTCACAGTGACCAGAGCAGAAGTGTCCACAAGAAAAGGCAAAGCTGTGAACACGTTCTACGTTCGTGGTGCATCTCGTTGCCCTGTTGATCCCAAGACCATAGACTGCATTCGCCAGTCCATTGGCAACACAATTCTCAAAGTCAAGGGAATCCCTCAACATTCAAAACCTGCTAATTCGCAGGACTCTTCTCCATTATCCAGATCCCTCTTTAGTGGCATTTTCAAGTCCAGATCCTTAGCAAACTTGGTCAAGTCTTACTCTTGA 1377 0.4386 MAFLSEVAMSASFSQYYEDYDQLFRRLNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTDQDGNKVTEESVLSYIRKNLGPDSCFTSPMRSVGVKQRMDHTAIELMGTDRPGLLSEVSAVLTNLKCNIVDAEVWTHNTRAAAVMHVTDEETGSAITDPERLSPIKELLRNLLGCCGNENGRAKTVVTDEVIHTDRRLHQMMFADRDYERDRDDYDDDEFDRKRRPIVNVVNCSDKDYSVVTIQSKDRPKLVFDTVCTLTDMQYVVFHASIDAERPEAYQEYYIRHVDGSPVNSDAERQRLVQCLEAAIERRVSEGLKLELCTADRVGLLSDVTRIFRENSLTVTRAEVSTRKGKAVNTFYVRGASRCPVDPKTIDCIRQSIGNTILKVKGIPQHSKPANSQDSSPLSRSLFSGIFKSRSLANLVKSYS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1502 458 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 19 420 IPR040217 -
Dere13g1502 458 Pfam ACT domain 133 185 IPR002912 -
Dere13g1502 458 Pfam ACT domain 43 99 IPR002912 -
Dere13g1502 458 CDD ACT_ACR_1 42 111 - -
Dere13g1502 458 SUPERFAMILY ACT-like 127 205 IPR045865 -
Dere13g1502 458 Gene3D - 127 201 - -
Dere13g1502 458 ProSiteProfiles ACT domain profile. 44 123 IPR002912 -
Dere13g1502 458 SUPERFAMILY ACT-like 343 412 IPR045865 -
Dere13g1502 458 ProSiteProfiles ACT domain profile. 347 423 IPR002912 -
Dere13g1502 458 ProSiteProfiles ACT domain profile. 132 220 IPR002912 -
Dere13g1502 458 CDD ACT_ACR_3 267 341 - -
Dere13g1502 458 SUPERFAMILY ACT-like 39 105 IPR045865 -
Dere13g1502 458 CDD ACT_ACR_2 131 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1502 Dere-ChrDere13 20138687 20141911 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1502 13 20138687 20141911 Dere13g1502 13 20138687 20141911 ECH