LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere13g1492	ATGTTGTATATACTGCTAGGAATTAGGATACTGCGAGGAAGATCAGAACAAGGGAATCTCGTGCTCCATCTCCTTTCAACTTATGTGCATCACAGTAAAAGCTGGCACTATCACAAAGTAAGATCTCAAGCCGTCATTCATCGGACTGAAGAAAAGGAAGAGAGCCCCTTAATGGCAAAAGGTAACCCTGGGAAAGTCGTTTGTTTATACCAGAACAAGGGAATCTCGGGCCCCATCTGCTTTCAACTTATGTGCATCACAGTAAAAGCTGGCACAGAAAGCCTGCAAGGTGCAGTATCTGATCGCCGTGGATGGGAAGGAATGGCTTGCTCTAGCTTAATTACGGTTGGTATTCCATGCAAGAGGTTGCAAGACAGTGTGACAGTGAAGTGTGGGCACTGCAGTAACCTATCCTTTCTCAGCACCAAGCCTCCCTCTCTAAATAACCAAAACGCTACTACTGATAACACACTTCTCACTCTTCAGCTTTGTCGGTTATATTATAAATCAGTGATGTTTCAACTGTTGTGGAAGGAGCAGGGGTTTTACAGTGACACATACAAGACGGAACATGCATCGTGTTCATCTTCCTCGTCTACTACTACATCTGGCGAGCCAGCAGCAGCATCAACCTTTGTCTGGGCTAGGTATATTCCAAATTCACCAACCTGCAGTTCAGTTTCTGGTGGTAGCAGCAACAACAATCCATGGAAATATGCTGATATAAAGATTAAGATATATAAGTATAAAGAAAAGCAATGGTCAATAAAATACACTAGTGATAATGTGCTTAAGCTTCCAGTCATAACAGATGACAAAACAGATAGCAAAAGCAGGAAGAAAATAATTGGAAATTCTCTGGCTGTAAAGGGGATTCCTGAGGGGAAAAGAAAAGCATATTCCGAGTGGCCTGATTCCATTTTGCATCTTTTCTTTGTCCCTTTGAATCTACCTCTGAACCTAGCCAAGTGCAAGTCAACACTATAG	987	0.4255	MLYILLGIRILRGRSEQGNLVLHLLSTYVHHSKSWHYHKVRSQAVIHRTEEKEESPLMAKGNPGKVVCLYQNKGISGPICFQLMCITVKAGTESLQGAVSDRRGWEGMACSSLITVGIPCKRLQDSVTVKCGHCSNLSFLSTKPPSLNNQNATTDNTLLTLQLCRLYYKSVMFQLLWKEQGFYSDTYKTEHASCSSSSSTTTSGEPAAASTFVWARYIPNSPTCSSVSGGSSNNNPWKYADIKIKIYKYKEKQWSIKYTSDNVLKLPVITDDKTDSKSRKKIIGNSLAVKGIPEGKRKAYSEWPDSILHLFFVPLNLPLNLAKCKSTL	328

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere13g1492	328	Pfam	YABBY protein	109	186	IPR006780	GO:0007275

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere13g1492	Dere-ChrDere13	20020308	20030421	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere13g1492	110	230	C2C2-YABBY Transcription Factor Family	AT1G69180	33.333	4.53e-09	53.5

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2C2-YABBY	Dere13g1492		YABBY	5e-09	CL0114