Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1488 ATGGTGGATTTGAGGCAAGTTTGGAGCATCATGTTCATGTCAATACCATCATCAACGTTGTATTATGCAGTGGCTTTGGCGTTTTGTGCATTCTTGGTACTGCTGAAATGGAGCCATTTAAGGTACAGAAGAAAAGGTGTGCCACCAGGAACAATGGGTTGGCCTATTTTTGGTGAGACTTCAGGGTTTCTCAATCAGGGACCAGATTTCATGAAAGCAAAGAGAGCAAGGTATGGGAATGTGTTCAAAACCCATGCATTAGGGTCACCTACAATTATATGCATGGACCCAGATGTGAACAAATACATCCTCTTGAATGAAGCAAAAGGTCTGGTTCCAGGGTACCCTGTGTCCATGAGGAACATCTTAGGGAATACCAATATTGCTGCAGTTCATGGTGCCCTTCACAAACGTATTAGAGGCTCACTATTGTCTGTCATTGGCCCTCCTGCTATCAAGGATCATCTTTTGACAAGAACTGACCAGTTTATGATGTCCTTCCTTCACAATTGGGCTGGCCAAATCATTGATATTCAAGAAAAAACCAAACAGATGGCATTCTTTGTGTCCATGAAGCAGATTGTAGATGATGAACCAAATTCTTTCCATGAGGCATTTAAAGCTACATTTGATTACATGGTGTTAGGAACGATATCTCTGCCCATTAATGTTCCAGGTACAAGCTACTACAGAGGACTCCAGACAAGAAAAAGAGTCATTGCAATTCTGAAGAAGCTTTTGGCCAAGAGAAGAGCTTCTTCAGGCACTCATGATGACATTCTTGATAAGCTTCTGAGATGCGAGGACGTCAAGTACAAGCTAAACGATGAAGAGATAATTGACCAAATCATCACCATCTTGTACTCTGGTTATGAGACTGTGTCAACGACCACAATGATGGCTGTCAAATTTCTCCATGATAATCCAAAAGTGCTTCAAGAACTAAGGGAAGAGCATTTCGCAATCCGACAGAGGAAAAGACCAGACGAACCAGTGAACTGGGAGGACTATAAGAATATGAGTCTTACTCGCGCAGTGATTTTTGAGACCTCGAGATTGGCCAGTGTTGTTAATGGGGTACTAAGGAAGACCTACGCAGATGTGGAAGTGAATGGATTTATCATTCCAAAGGGATGGAGAGTATATGCATACATAAGGGAGATCAACTATGACCCCTTCCTCTATCCAGAGCCTTTCACTTTCAACCCAAGGAGATGGCTGGAGAAGGGCTTGGAGACTCATCAACACAACATGCTGTTTGGGACAGGAGTTAGAATATGTCCTGGAAAAGAATTGGGCATTGTTAAAATCTGTGTCTTCCTTCACTACTTTCTCACTCAATTTAGGTGGGAAGAAGAGGAGGGAAATGAACTTCGAAAATTTCCAAGAGTTGAAGCACCAAATGGACTCAACATAAGGGTCGTAGCTTATTAG 1434 0.424 MVDLRQVWSIMFMSIPSSTLYYAVALAFCAFLVLLKWSHLRYRRKGVPPGTMGWPIFGETSGFLNQGPDFMKAKRARYGNVFKTHALGSPTIICMDPDVNKYILLNEAKGLVPGYPVSMRNILGNTNIAAVHGALHKRIRGSLLSVIGPPAIKDHLLTRTDQFMMSFLHNWAGQIIDIQEKTKQMAFFVSMKQIVDDEPNSFHEAFKATFDYMVLGTISLPINVPGTSYYRGLQTRKRVIAILKKLLAKRRASSGTHDDILDKLLRCEDVKYKLNDEEIIDQIITILYSGYETVSTTTMMAVKFLHDNPKVLQELREEHFAIRQRKRPDEPVNWEDYKNMSLTRAVIFETSRLASVVNGVLRKTYADVEVNGFIIPKGWRVYAYIREINYDPFLYPEPFTFNPRRWLEKGLETHQHNMLFGTGVRICPGKELGIVKICVFLHYFLTQFRWEEEEGNELRKFPRVEAPNGLNIRVVAY 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1488 477 FunFam Cytochrome P450 85A1 38 476 - -
Dere13g1488 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Dere13g1488 477 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g1488 477 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g1488 477 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g1488 477 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g1488 477 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g1488 477 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g1488 477 Pfam Cytochrome P450 48 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g1488 477 CDD CYP90-like 75 474 - -
Dere13g1488 477 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g1488 477 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g1488 477 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g1488 477 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g1488 477 PANTHER CYTOCHROME P450 26 45 452 - -
Dere13g1488 477 SUPERFAMILY Cytochrome P450 40 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere13g1488 477 Gene3D Cytochrome P450 39 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1488 Dere-ChrDere13 19984192 19988172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1488 95 477 Cytochrome P450 AT5G38970 57.031 5.46e-163 464