Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1476 ATGGAAGAAGCACGTGGTTGTTCTCTGTCCAGTCAAGCTGAATCTGCCTTATCTCATGACAGTACTCAGAGGTCTATTTTCAGCGGGCATGTGAAGAAGAGGTCTCATGCAAGTCGTTCTTGGATAAAAATTGATCAGGATGGGAATTCACAGACTGTGACACTTGACAAGGCTACTATTATGAGACATTGTTCTCTGCCTTCAAGAGATCTCAGACTACTAGATCCTATGTTCATTTATCCTTCTAGCATATTAGGACGGGAAAAGGCTATTGTAGTCAACCTTGTGCAAATCCGGTGCATAATCACTGCTGATGAGGTTTTCCTAATGAACTCATTGGATGGCAGTGTTGGTCAATACAAGTCAGAATTATGCAATCGACTTCAGAAAGGAAAATCTGATGATATGCCTTTTGAAATTTGGGCACTGGAGCTGGCTCTGGAGTTGACGTGCACATCTTTAGATGCTCAGGTTCATGAACTGGAAATGGAAATATGTCCAGTGTTAGATGAACTGGCCTCATCTATCAGTACTCTCAATCTAGAACGGGTTCGAAGATTTAAAGGTCACCTCCTTGCTTTGACTCAACGAGTTCAAAAGGTTCGTGATGAAATAGAGCAACTCATGGATGATGATGGTGACATGGCTGAGATGTGCTTGACTGAGAAGAAGAGAAGATCAGATACTTACCCTTTAAATGATTTTGGTCTTCAAACTCACAGGTCAGGTAGTGCTGAAGTGATTCCAAAATCAGCTCCTGCTTCACCAGATAGGTCCGTCAGTGGGGTCCAGATGTTGCAAAGGGCTTTCAGCAGCATTGGAAATTCGAGTAAACATGGGAGTCTGACAAGTTCTTCCCATAATGTGGAAAAGATTGAGCCATTAGAAATGTTGCTTGAAGCATACTTTGTCGTCATTGATAATACTCTTACCAAGTCACTGTCGCTCAAAGAATATATAGATGACACTGAAGATTTTATCAACATAAAATTGGGCAATATTCAGAACCAACTAATACAATACGAGTTGCTTCTTACAGCAGCAACATTGGTAGCTACACTATATGCCACAGTGACAGCAGTCTTTGGAATGAACTTTCACACTGCAGTTTTTGACTATCCATGTGGATTCAATTTGGTTTTGATAATCACGAGCATTGCTTGTGCGGTTTTGTACTGCTCCTTTCTACTCTATTTTAGGTACAAGAAGGTGCTGCCGGCATGA 1224 0.4142 MEEARGCSLSSQAESALSHDSTQRSIFSGHVKKRSHASRSWIKIDQDGNSQTVTLDKATIMRHCSLPSRDLRLLDPMFIYPSSILGREKAIVVNLVQIRCIITADEVFLMNSLDGSVGQYKSELCNRLQKGKSDDMPFEIWALELALELTCTSLDAQVHELEMEICPVLDELASSISTLNLERVRRFKGHLLALTQRVQKVRDEIEQLMDDDGDMAEMCLTEKKRRSDTYPLNDFGLQTHRSGSAEVIPKSAPASPDRSVSGVQMLQRAFSSIGNSSKHGSLTSSSHNVEKIEPLEMLLEAYFVVIDNTLTKSLSLKEYIDDTEDFINIKLGNIQNQLIQYELLLTAATLVATLYATVTAVFGMNFHTAVFDYPCGFNLVLIITSIACAVLYCSFLLYFRYKKVLPA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1476 407 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 344 396 IPR045863 -
Dere13g1476 407 CDD Mrs2_Mfm1p-like 41 404 IPR039204 -
Dere13g1476 407 Gene3D - 25 112 - -
Dere13g1476 407 FunFam Magnesium transporter MRS2-1 29 112 - -
Dere13g1476 407 MobiDBLite consensus disorder prediction 1 22 - -
Dere13g1476 407 MobiDBLite consensus disorder prediction 8 22 - -
Dere13g1476 407 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 21 405 IPR039204 -
Dere13g1476 407 Coils Coil 191 211 - -
Dere13g1476 407 Gene3D Magnesium transport protein CorA, transmembrane region 116 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1476 Dere-ChrDere13 19894175 19897218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1476 27 406 MRS2 Gene Family AT2G03620 66.067 9.48e-164 464