Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1475 ATGAAGAAAAACTACAAAGTAAAGTTATGCCAGTATGTTTTGAGCTTTCTGATGCACCTTTTCTTCCATTTAACTACTTTACCAACCTGTGACTCAACTGACTTCCCTTCAGATAAAATCCTCCTCAACTGTGGTTCCTCGGGATCATCACAATTCAATGGAGGAAAATGGATAGGTGACACTGGCTCCAATTTCTTGCCTCCAGCATATGACAAAACATCTTCTGCACTCTTGCTCTCAAACCTAAGCTGCGTACCAGAGGTCCCATACTCAACGGCACGCGTAATGCATTCTCCATTCACGTACTCTATCCCCTTCTCCCATGGTCTTATATTTATCCGTTTTTACTTTCTTTCAACTTCGTATCTGGGGTTAAACCCTTCCAGGGCTTACTTTTCAGTCAAAACTGGTCCTTATACTCTGTTAAATAATTTCAGCCCTTCTATTACTGCAGAAGAGCTCAAATCAGACTACTTCACTAAGGACTTCTTGGAACGGTTCTATATTAATGATGAATACGCTCTTGAAATGCTTTACCTGGTCAATGTCGGAAATGATGCACATGCTGTCGATGCTGTCAATGTATTTAGGACTTGGGTCGAAGATTTAAGCTACGTTTCTGGTTTTCAATATGGAAGTGTCCTTAATATTAAAGATCGTCCTACTGACATCACTTACAAATCTTCCAAATCCAATTACTATAATTATTCAGCTCCAGAAGAACTATATTGGACCGCCAGGACAATGGGTAGCCAAGAAGACACTAACAAGAGGTATAATTTAACTTGGTCATTCCCAGTTGATTCCGGTTTCAAATACCTCGTTAGGCTTCATTTCTGTGAGATATCCATGGAGGTAACCCAGGTCAACCAAAGGGTGTTCAAGGTATATATCAACAACCAAACAGCGGAGGAGAGCATGGATTTAGTTGCTCTGACTGGTGCACCATTTGTCACATTATACAGAGACTATGTTGTTATGGTTCCGATGGAAAGTGGGAGAAAGCAAGATTTGTTGATTGCCCTTCACCCCAACATGAAGTCAAAACCCAAGTATGCTGATGCTATACTGAATGGCATTGAGATCATCAAGTTAAGTGACAGTAGTCACAATCTTGCTGCTAGTATCCAAATGATAATGGAACAAAAGGAGAAGAAAATTCGGACAATATTTAAGTGGGGAATTTTTTGGACGGTCCCATCAAACTCAGCAGGTCAAAATACCAAAAATTTGCAGTTAACAATGAGCTTAGGTCAATGCAACCAATTCACGTTAGCAGAAATCAGAACAGCCACGAAGAACTTCAGTGAAGCTCTTGTCATCGGGGAGGGAGGCTTTGGCAAAGTTTACAAAGGATTGATCCATGATGGAGTCACTACTTTGGCAATAAAGCGCTGTAATCCTTCATCCCACCAAGGATATAGAGAGTTTCAAAACGAAATCAATTTGTTATCCTCATTCCGTCACATGAATTTAGTGTCACTGCTGGGCTACTGCCAAGAGGACAATGAGCTGATACTTGTCTATGAATACATGGCTGAAGGCACTCTTCGCGATCACTTATACAAGACACAGAAACAGCCACTGCCTTGGAATCAAAGACTAGAGATTTGCATTGCTGCAGCTCGAGGATTACATTACCTCCACACAAGCAAAAAGCACCCGGTCATTCACCGAGATGTCAAGTCAGCCAATATACTGTTGGATCACAATTTGGTTGCCAAAATTGCAGATTTTGGGTTATCTAGAATTGGCCCCACCTCCACATCCTGCAACCATGTTAGCACTGATGTTAAGGGTACTTCTGGTTATTTAGACCCAGAGTACTACAGAAGAAGAAAGCTAACCGAAAAATCTGATGTTTATTCATTTGGGGTGGTGCTGTTTGAAGTGTTATGTGGAAGGCCAGCGGTGAATCCTATGGCAGTGGTAGAGGATGACGAGAAGATTGGCTTGGTTGAGTGGGCTTGGCAGTGTCATCTCTCTGGGACATTTCAACGAATGGTCGACCCGCATTTACAAGGAGGGGTTTCATCAGATTGCCTCAAAGCATTTGCAGATATTGGCATCAAGTGCTTAGCAGACAAGAGCACAGATAGGCCAACTATGGGGGAAGTGCTTAGTAACTTGGAGAAGCTTCAGTTGTTGCAGGAGAGTTTGGATGCACAAGAAACAAAGAGAGATTCACATTTACTTATCGGAATAAATGAAAGCACCAAAGCCAATAGGTTAATTGATGAACAACTCTTACACGATGCAATCATTGTGCCAATGGATTGTGTTTAG 2286 0.4173 MKKNYKVKLCQYVLSFLMHLFFHLTTLPTCDSTDFPSDKILLNCGSSGSSQFNGGKWIGDTGSNFLPPAYDKTSSALLLSNLSCVPEVPYSTARVMHSPFTYSIPFSHGLIFIRFYFLSTSYLGLNPSRAYFSVKTGPYTLLNNFSPSITAEELKSDYFTKDFLERFYINDEYALEMLYLVNVGNDAHAVDAVNVFRTWVEDLSYVSGFQYGSVLNIKDRPTDITYKSSKSNYYNYSAPEELYWTARTMGSQEDTNKRYNLTWSFPVDSGFKYLVRLHFCEISMEVTQVNQRVFKVYINNQTAEESMDLVALTGAPFVTLYRDYVVMVPMESGRKQDLLIALHPNMKSKPKYADAILNGIEIIKLSDSSHNLAASIQMIMEQKEKKIRTIFKWGIFWTVPSNSAGQNTKNLQLTMSLGQCNQFTLAEIRTATKNFSEALVIGEGGFGKVYKGLIHDGVTTLAIKRCNPSSHQGYREFQNEINLLSSFRHMNLVSLLGYCQEDNELILVYEYMAEGTLRDHLYKTQKQPLPWNQRLEICIAAARGLHYLHTSKKHPVIHRDVKSANILLDHNLVAKIADFGLSRIGPTSTSCNHVSTDVKGTSGYLDPEYYRRRKLTEKSDVYSFGVVLFEVLCGRPAVNPMAVVEDDEKIGLVEWAWQCHLSGTFQRMVDPHLQGGVSSDCLKAFADIGIKCLADKSTDRPTMGEVLSNLEKLQLLQESLDAQETKRDSHLLIGINESTKANRLIDEQLLHDAIIVPMDCV 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1475 761 Pfam Protein tyrosine and serine/threonine kinase 440 710 IPR001245 GO:0004672|GO:0006468
Dere13g1475 761 PANTHER OS07G0166700 PROTEIN 419 717 IPR045272 GO:0004714|GO:0006468
Dere13g1475 761 SUPERFAMILY Protein kinase-like (PK-like) 410 711 IPR011009 -
Dere13g1475 761 Gene3D Transferase(Phosphotransferase) domain 1 512 737 - -
Dere13g1475 761 SMART serkin_6 435 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1475 761 FunFam FERONIA receptor-like kinase 173 366 - -
Dere13g1475 761 FunFam Receptor-like protein kinase FERONIA 512 731 - -
Dere13g1475 761 Gene3D - 40 171 - -
Dere13g1475 761 Gene3D - 173 366 - -
Dere13g1475 761 CDD STKc_IRAK 441 713 - -
Dere13g1475 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 556 568 IPR008271 GO:0004672|GO:0006468
Dere13g1475 761 Pfam Malectin-like domain 169 364 IPR024788 -
Dere13g1475 761 Gene3D Phosphorylase Kinase; domain 1 398 511 - -
Dere13g1475 761 ProSiteProfiles Protein kinase domain profile. 435 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1475 761 FunFam receptor-like protein kinase FERONIA 399 511 - -
Dere13g1475 761 ProSitePatterns Protein kinases ATP-binding region signature. 441 464 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1475 Dere-ChrDere13 19889972 19892492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1475 32 719 Receptor kinase-like Gene Family AT5G39000 39.169 8.80e-180 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere13g1475 PK_Tyr_Ser-Thr 1.2e-50 CL0016