Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1474 ATGAAGTTGACATTGTCAGGAGCAAGGAAGAGTACTCCAAGTCACACCAATTACGATGGCACGAAAAGTCATGTGCCTGTTTATAGAACTGGTTATCCCAATGTTGGATACATAGATCCAGAGTACTTTCGGCGTCATAAGTTGACTGAGCAATCTGATGTATACTCATTTGGGGTGGTGTTATTGGAGGTGGTAACTGGTAAGTGCAAGGCCTGCTGAAAGGTAGCAGCAGAGTCTTTTGAGATATACATTGAGGTGGCCAAGAAATGCTCGGCTGAAAGAGGGGTGGAGCGCCCGCCCCCCACCCCAATTGGTGATGTGCTGCAGAGCCTTGTAATGGCATTGCAGCTTCAGAAAATTGCTACTATGGCACCAGGTAAAGATGTCCACATAATTGAAAATGCTGGTTCAAATAACAATTCAGATTTGACACCTGGGGTTGAGTTCTCCGAGATCATAACGCCCATTGGACGATGA 477 0.4591 MKLTLSGARKSTPSHTNYDGTKSHVPVYRTGYPNVGYIDPEYFRRHKLTEQSDVYSFGVVLLEVVTGKCKACXKVAAESFEIYIEVAKKCSAERGVERPPPTPIGDVLQSLVMALQLQKIATMAPGKDVHIIENAGSNNNSDLTPGVEFSEIITPIGR 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1474 158 Pfam Protein tyrosine and serine/threonine kinase 34 90 IPR001245 GO:0004672|GO:0006468
Dere13g1474 158 SUPERFAMILY Protein kinase-like (PK-like) 24 113 IPR011009 -
Dere13g1474 158 Gene3D Transferase(Phosphotransferase) domain 1 5 140 - -
Dere13g1474 158 MobiDBLite consensus disorder prediction 1 23 - -
Dere13g1474 158 PANTHER OS07G0166700 PROTEIN 33 69 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1474 Dere-ChrDere13 19888327 19889048 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1474 34 148 Receptor kinase-like Gene Family AT5G61350 35.811 1.80e-18 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dere13g1474 PK_Tyr_Ser-Thr 9.9e-08 CL0016