Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1473 ATGAATACTTGCTTTTGTTCTCTGTATATCATTTTGTTTCTACATCTTCAGCTCTTCCACATGCACATTGCTTTTGCTTATGATACCAGTTATTTTCCCTCAGAAAACATTGCCCTCAACTGTGGCACTAAGTCATCAAAACTTGTGCCATATGATGGAAGGAACTGGACTGGTGATGCAGGTTCACAGTATGTATCCTCTAATGCAGACACCAAGTCCCTGATAGCCAAAGCCTCGCTGTTTAATACATCTGCTCCCGAAGTTCCCTATATGACTGCTCGAATCTTTCAGTCTCAATTCACCTACAGATTCAATGTGACTCCAGGTCCAAAATTCATCCGCCTTCACTTCTACCCAACTTCTTACTTGGGTCTCAATGTCTCAAAAGCTTTTGTATCAGTCACTGCTGGTAACTTCACTCTCCTGCATAACTTCAGTGTTTCCCTTACTACTGATTACTTCAACTTCGCATATATGATGAAAGAGTTTATCATCCATGTCAATGGAAGGACTTTGGAGCTGACTTTCACTCCATCATCCAATGCTTCTGACGCCTATGCTTTTGTGAACGGAATCGAAGTTGTTTCCATGCCTTCTAATCTCTATATTCAGGGTGATAATGCCCATCTTCCTTTAGTTGGTCATAATCCTGAGCTATATTACATTTATAACAATTCTGCCTTGGGAACCATGTATCGGATCAATGCAGGAGGTGATGAGATTCCAGCCAAATATGATACCGGAATGTTTCGTACATGGACTGGAGATGAAGATTACGTATTTTTACCTATAATAGGTGTTGAACCTTTTGATATGAACATACCAATTCTGTATTCGAGAACTGTTCCAGAATACACTGCACCAAAAGGTGTTTACCGCACATGCCGTGCAATGACACCCTTTCCAGATAGCCTTATCAATTTAAACTATAATCTGTCGTGGTTCTTTCCGATTGATTCTGGTTTCAATTATCTAGTTAGGCTTCACTTTTGTGATATTATCTCAAACATAACTTTGGTGAATCAGATAGTTTTTAATATATATTTAAATAATCAAACAGCTATGGCTAATGCTGATGTAATTGCTATGAGTGGTGGTCCTGGAGTTCCGAGGTACAGAGACTTCATTGTCATGGTGCCTGAAGCAAGCGAGGGAAAGCAGGATCTTTGGATAGATCTTTCTCCAAATGTGGAAGCAAAACCTCAGTATTATACTGCTTTCTTGAATGGGGTGGGGATCTTTAAACTAAGCTATGAGGATGGAAATCTCGCAGGGCCTAATCCTGTCAGTAGCAAGTCTATGTCAGCTGTGCCAGTGCCCCATATTGAACCGCCTAAGAAGCCAAAGAAAATCACATTCATCATCATTGGATGTGGACTGAGTGCTGTGGCACTTGGACTACCAATTCTCTTATGCTTGATTGTTTTCAGGTTGAAGTTAATAAGGCCCAGGAGGATGTCATGGTGTGATCTCTTGATCCTTACTCCTAATCAAATGAAAAAATCTTACAAGTCTTCTTTTCGCCATCAATTGTCCATGGATGAGATAAGAGAGGCAACAAATAACTTTGATGAGGCACTGATCGTTGGCATGGGTGCGTTTGGCAAAGTTTACAAGGGTAGTTTTGATAATGGGTCTACCCTTGTAGCTGTGAAGCGGAGCAATCCAATGTCAGAACAAGGTGCATTAGAATTTGAGACAGAGATCCATATGCTCTCGCAGCTGCGCCACCACAACCTTGTTTCTCTAATGGGTTATTGCCAAGAAGATGGGGAGATGATACTGGCCTATGAGTATATGTCCAACGGTACTCTGTTCGATCATCTTCATTTGAGGCAGAGGGAAGAACTCCCCTTGTCATGGATTGAACGTCTTGAGATATGCATTGGAGTTGCAAGGGGTTTACACTACCTCCACACTGGCACGTCGCACAAGATCATCCATCGTGACATCAAGACAAGCAATATACTCTTAGACCACAATTGGGTGGCCAAAATTTCCGACTTTTGCTTGTCAAAGGCAGGCAACCCAGCCTTAGTCAGCACCAATGTCAAGGGCAGTGTTGGATACATAGATCCAGAGTACTTTCGGCGTCATAAGTTGACTGAGAAATCTGATGTATACTCATTTGGGGTGTTGTTGATGGAGGTGGTAAGTGCAAGGCCTGCTGTGAATCCAGTTGAAGACGATGAGCATGGTAACTTGGTAGACTGGGCTCTGTATTGCTGGGAGAATGGCACTATAACTCAACTGTTGGACCCCGACCTGGTAGGAAAGGTAGCAGCAGAGTCTTTTGAGATATACATTGAGGTGGCCAAGAAATGCTTGGCTGAAAGAGGGGTGGAGCGCCCTCCCATTGGTGATGTGCTGCAGAGCCTTGTAATGGCATTGCAGCTTCAGAAAAATGCTATTATGGCACCAGGTAAAGATGTCCACATAGAAAATACTGGTTCAAATAACAACTCAGATTTGACACCTGGGATTGAGTTCTCTGAGATCATAACGCCCATTGGACGATGA 2520 0.4258 MNTCFCSLYIILFLHLQLFHMHIAFAYDTSYFPSENIALNCGTKSSKLVPYDGRNWTGDAGSQYVSSNADTKSLIAKASLFNTSAPEVPYMTARIFQSQFTYRFNVTPGPKFIRLHFYPTSYLGLNVSKAFVSVTAGNFTLLHNFSVSLTTDYFNFAYMMKEFIIHVNGRTLELTFTPSSNASDAYAFVNGIEVVSMPSNLYIQGDNAHLPLVGHNPELYYIYNNSALGTMYRINAGGDEIPAKYDTGMFRTWTGDEDYVFLPIIGVEPFDMNIPILYSRTVPEYTAPKGVYRTCRAMTPFPDSLINLNYNLSWFFPIDSGFNYLVRLHFCDIISNITLVNQIVFNIYLNNQTAMANADVIAMSGGPGVPRYRDFIVMVPEASEGKQDLWIDLSPNVEAKPQYYTAFLNGVGIFKLSYEDGNLAGPNPVSSKSMSAVPVPHIEPPKKPKKITFIIIGCGLSAVALGLPILLCLIVFRLKLIRPRRMSWCDLLILTPNQMKKSYKSSFRHQLSMDEIREATNNFDEALIVGMGAFGKVYKGSFDNGSTLVAVKRSNPMSEQGALEFETEIHMLSQLRHHNLVSLMGYCQEDGEMILAYEYMSNGTLFDHLHLRQREELPLSWIERLEICIGVARGLHYLHTGTSHKIIHRDIKTSNILLDHNWVAKISDFCLSKAGNPALVSTNVKGSVGYIDPEYFRRHKLTEKSDVYSFGVLLMEVVSARPAVNPVEDDEHGNLVDWALYCWENGTITQLLDPDLVGKVAAESFEIYIEVAKKCLAERGVERPPIGDVLQSLVMALQLQKNAIMAPGKDVHIENTGSNNNSDLTPGIEFSEIITPIGR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1473 839 ProSitePatterns Protein kinases ATP-binding region signature. 529 552 IPR017441 GO:0005524
Dere13g1473 839 CDD STKc_IRAK 529 793 - -
Dere13g1473 839 FunFam Os07g0541700 protein 600 685 - -
Dere13g1473 839 SUPERFAMILY Protein kinase-like (PK-like) 501 794 IPR011009 -
Dere13g1473 839 Pfam Malectin-like domain 39 415 IPR024788 -
Dere13g1473 839 Pfam Protein tyrosine and serine/threonine kinase 529 720 IPR001245 GO:0004672|GO:0006468
Dere13g1473 839 Gene3D - 228 417 - -
Dere13g1473 839 Gene3D - 36 198 - -
Dere13g1473 839 ProSiteProfiles Protein kinase domain profile. 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1473 839 PANTHER OS03G0124300 PROTEIN-RELATED 10 473 IPR046957 GO:0004672
Dere13g1473 839 Gene3D Transferase(Phosphotransferase) domain 1 600 817 - -
Dere13g1473 839 Gene3D Phosphorylase Kinase; domain 1 492 599 - -
Dere13g1473 839 SMART serkin_6 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1473 839 FunFam receptor-like protein kinase FERONIA 493 599 - -
Dere13g1473 839 FunFam FERONIA receptor-like kinase 226 417 - -
Dere13g1473 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Dere13g1473 839 FunFam FERONIA receptor-like kinase 36 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1473 Dere-ChrDere13 19885119 19887638 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1473 31 803 Receptor kinase-like Gene Family AT3G51550 50.936 0.0 745
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere13g1473 Malectin_like 1.4e-34 CL0202