Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1465 ATGACTTCTTCAAGCAACCCAGTTCACTTTTCAGTTCAGAGACCTCGAATTCCATCACTTTATTTGCCACCCAGAAGAATTTCGGCCAACCATGGCTTGCTTAAAGCTCGTGTGCTTGATTCCAAAGACTCGAGTTTGGCGTTCTCGCCACTGTTGGAGAATGGGAAGCATCTGGTGCCACAATCAATTGTGCATTCTGGGAAAGCATTGACGTTGGGCATGTTTGGTTGGAATCAGCAACTGAGGCGACGAAGTTCGGTTGAATTTCCTGTTGTTGCAGCGGCAGCTGCAGATGCTGACGATGGTGAAATCGAAATCCCAGATGGGACCGTTAAGCCCACGAAGAGTTTTAGTGAGAAATATCCCGCGTTGGTTACTGGTTTCTTTTTCTTTATGTGGTATTTCTTAAATGTGATTTTCAACATACTCAACAAGAAAGTTTATAATTACTTCCCGTATCCCTACTTTGTTTCTGTTGTGCATCTCCTTGTGGGTGTGGGATACTGCTTTGTTTGCTGGGCTGTTGGTCTACCAAAACGTGCTCCAATTGATAAGGAGCTCTTGGCACTATTGACTCCAGTTGCATTTTGTCATGCCCTTGGTCATGTCATGTCCAATGTATCATTTGCTGCTGTTGCTGTGTCTTTTACGCACACCATAAAAGCTCTGGAGCCCTTTTTTAATGCTGCAGCTTCCCAGTTTGTCTTGGGCCATCAGATTCCATTGTCTCTTTGGCTATCCTTGGCCCCTGTTGTTATTGGTGTATCAATGGCATCACTAACTGAACTGTCTTTCAACTGGACTGGGTTCATCAGTGCGATGATATCAAATATAGCATTCACTTACAGAAGTATATATTCAAAGAAAGCAATGACTGGAATGGACAGTACAAACGTATACGCCTATATTTCATTAATTGCCCTCTTCTTTTGCATCCCCCCAGCAATATTTATTGAGGGTCCTCAACTTATGGAATATGGTTTTAGAAATGCTATTGCAAAAGTAGGCCTGTTAAAGTTTTTGTCTGATCTGTTCTGGATTGGAATGTTTTACCATCTGTACAATCAGCTGGCTACTAATACTTTGGAACGGGTTGTGCCACTGACACATGCCGTTGGGAATGTGTTGAAGCGAGTTTTTGTCATTGGATTCTCTATAGTGGTTTTTGGCAACAAGATATCCACACAAACTGGCATTGGCACTGCTATAGCAATAGCAGGCGTTGCCATCTATTCTCTGATAAAGGCAGACATGGAAGAGCGAAAACGGAAAGCTCCTGCAGCTGTTTAA 1290 0.4302 MTSSSNPVHFSVQRPRIPSLYLPPRRISANHGLLKARVLDSKDSSLAFSPLLENGKHLVPQSIVHSGKALTLGMFGWNQQLRRRSSVEFPVVAAAAADADDGEIEIPDGTVKPTKSFSEKYPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVVHLLVGVGYCFVCWAVGLPKRAPIDKELLALLTPVAFCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYISLIALFFCIPPAIFIEGPQLMEYGFRNAIAKVGLLKFLSDLFWIGMFYHLYNQLATNTLERVVPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKADMEERKRKAPAAV 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1465 429 SUPERFAMILY Multidrug resistance efflux transporter EmrE 167 261 - -
Dere13g1465 429 PANTHER SOLUTE CARRIER FAMILY 35 127 419 - -
Dere13g1465 429 Pfam Triose-phosphate Transporter family 125 412 IPR004853 -
Dere13g1465 429 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 124 422 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1465 Dere-ChrDere13 19820178 19824880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1465 90 423 Antiporters AT5G46110 79.042 0.0 541