Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1432 ATGGGTGGAATTGGTGACCAGCACCCGTCGTCCGCGCCGCCGGGGCCAGCACCGCGACCCACCATCGCTCTCCCGCCACGCACTTCCATGGACTCCCTTTTCAATGGTGGGCCCTCTGGCGGCGCCTTTGGGTTCAGCCCCGGTCCCATGACTCTTGTTTCCAGTTTCTTCAACGAGAACGACGACTTCAAGTCGTTCTCGCAGCTTCTAGCCGGCGCTATGTCGTCTCCAGTGGCGCCGGAGCAGAAGGACTCCGGACAAGTTGGCAGCAGCGGCGGCGGCGGCGGGGGATTTAATCAGAATAGGCCTTCGGGTTTGGCTGTTATGCAGTCGCCGATGTTCACGGTTCCGCCGGGGTTGAGCCCTGCTGGTTTGCTCGATTCGCCTGGGCTCTTTTCAGCTTCTCAGGATTGTGGGGAATGTTTGGCTTTTCTATTCACCTATATGATTTCTGAGAAAAGATTGGGAAACAGAATGACTGTTCTGTCGTTGACTCACTCCATTATAAGAAGCTTGTCTGTGATATTTGAAGGAACTCTCCGTTCTCCATCTTCTGATATTACTGGACCTTTTGGAATATCACACCAGCAAGCTCTAGCACAGGTCACAGCTCAGACTTTGCAGGCGAACCCGAAAATGCATATCCAAAATGAAAATCCATCTTCTGTATCTGCAGCACCTGCATCCACTTCCAATACTAGACAGCATCAGATGCCACCACACTCAATGCCAGACTCTGGTACAACAATGAAGGAATGCCCTGACGATGGCTTCAACTGGCGCAAGTATGGCCAGAAACAGGTGAAAGGTAGTGAGTTCCCTCGAAGTTATTATAAGTGCACGCATCCAAACTGCCCCGTGAAGAAAAAGGTGGAGCGATCCCTCGATGATGACCATGTTGTCGCAATCATTTACAAAGGACAGCACAATCATCAACCTCCTCGCCCCAACAAGCGCGCAAAAGACCCGGTAGCAACAACCTCGAATGAGAATTCATTTATGCAAGGGAATTTTGATGTGAAAGAAGGGAAAACTTGTGGGTCAGCGGCTGAACATGTATCAGAAGGATCAAGTGACAGTGAGCAAGCTGCAGGTGATCGCGAAACTGAAGTAGAGGAGAAAAATGATGAGCCTGACCCCAAGAGGAGAAATACAGAAGCCAGGGTGTCTGAGGCAGCCTCTTCGCATAGGACTGCCATCGAGCCTAGAATCATTGTGCAGACGACAAGTGAAGTTGATCTCTTAGACGATGGGTATAGATGGCGCAAATATGGGCAGAAAGTTGTGAAAGGAAACCCTTACCCAAGGAGCTACTACAAGTGTACAACCGCTGGTTGCAATGTCCGGAAGCATGTCGAGAGGGCTTCGACAGATCCTAAAGCTGTCATTACAACATATGAAGGGAAACACAACCACGACGTGCCAGCAGCTAAAAGTAACAGTCACACTATTGCCAACAACACTGCATCACAGCTAAAAGCCCACAATACCACAATATCAGAGAAGCATAGTTTCAACATCAGAGGTGTTGGGGCCAATGAGCAACAGCCTGTGGCACGTCTAAGGCTGAAGGAAGAGCAGATAACCTAG 1590 0.5025 MGGIGDQHPSSAPPGPAPRPTIALPPRTSMDSLFNGGPSGGAFGFSPGPMTLVSSFFNENDDFKSFSQLLAGAMSSPVAPEQKDSGQVGSSGGGGGGFNQNRPSGLAVMQSPMFTVPPGLSPAGLLDSPGLFSASQDCGECLAFLFTYMISEKRLGNRMTVLSLTHSIIRSLSVIFEGTLRSPSSDITGPFGISHQQALAQVTAQTLQANPKMHIQNENPSSVSAAPASTSNTRQHQMPPHSMPDSGTTMKECPDDGFNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLDDDHVVAIIYKGQHNHQPPRPNKRAKDPVATTSNENSFMQGNFDVKEGKTCGSAAEHVSEGSSDSEQAAGDRETEVEEKNDEPDPKRRNTEARVSEAASSHRTAIEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKSNSHTIANNTASQLKAHNTTISEKHSFNIRGVGANEQQPVARLRLKEEQIT 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1432 529 MobiDBLite consensus disorder prediction 215 244 - -
Dere13g1432 529 SUPERFAMILY WRKY DNA-binding domain 407 475 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere13g1432 529 FunFam WRKY transcription factor 33 402 468 - -
Dere13g1432 529 Gene3D WRKY domain 400 476 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere13g1432 529 Gene3D WRKY domain 245 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere13g1432 529 MobiDBLite consensus disorder prediction 75 104 - -
Dere13g1432 529 ProSiteProfiles WRKY domain profile. 249 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere13g1432 529 MobiDBLite consensus disorder prediction 361 390 - -
Dere13g1432 529 Pfam WRKY DNA -binding domain 416 472 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere13g1432 529 Pfam WRKY DNA -binding domain 255 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere13g1432 529 MobiDBLite consensus disorder prediction 80 104 - -
Dere13g1432 529 SUPERFAMILY WRKY DNA-binding domain 253 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere13g1432 529 MobiDBLite consensus disorder prediction 1 36 - -
Dere13g1432 529 MobiDBLite consensus disorder prediction 215 258 - -
Dere13g1432 529 FunFam WRKY transcription factor 240 315 - -
Dere13g1432 529 SMART WRKY_cls 254 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere13g1432 529 SMART WRKY_cls 415 474 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere13g1432 529 ProSiteProfiles WRKY domain profile. 410 475 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere13g1432 529 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 194 499 IPR044810 GO:0003700
Dere13g1432 529 MobiDBLite consensus disorder prediction 306 396 - -
Dere13g1432 529 MobiDBLite consensus disorder prediction 322 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1432 Dere-ChrDere13 19493502 19497659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1432 19 529 WRKY Transcription Factor Family AT2G03340 49.825 2.59e-148 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere13g1432 WRKY 2.1e-26 CL0274