Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1422 ATGAGCTCCGACACGTCCACCGGGGGCGGTTCTTCCGGCAGCTCTTCGTCGGCGTCGGACAGGGGCAAGAAGAAGGAGAAGGTTAGAGTGAGTCGCACTTCCATGATCCTCTGGCATTCTCACCAAAACGACGCCGCCTCTGTTCGGAAGCTTCTGGAGGAGGATCGGTCACTTGTGACGGCCAGAGATTACGATAATCGCACTCCGCTTCATGTCGCGTCCCTCCATGGTTGGATTGACGTTGCTCAATGCTTGATTGAGTTTGGCGCCGATGTCAACGCCCAGGATCGTTGGAAAAATACGCCTCTAGCTGATGCAGAAGGGGCTAAAAAGTATAGCATGATGGAGCTTTTAAAATCATATGGAGGCTTGTCTTATGGCCAAAGTGGAAGTCATTTTGAACAAAGGGCCGTTGCTCCCCCATTGCCCAACAAGTGTGATTGGGAAGTCGACCCTTCTGAGCTGGACTTCTCACATTCAACTCGTATTGGAAAGGGATCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGGACACCAGTTGCTGTCAAACGCATTCTTCCATCTCTTTCAGATGATAAATTGGTGATCCAGGACTTCAGGCATGAGGTTAATTTGCTAGTAAAGCTTCGACACCCAAATGTAGTCCAGTTTCTTGGAGCTGTTACCGATAAGAAGCCCCTTATGTTAATTACTGAATACCTAAGAGGGGGTGATCTTCATCAGTATCTTAAGGAAAAAGGTTCAATCAGTCCTTCAACAGCTGTCAGCTTTGCCTTAGATATCGCCAGAGGGATGGCCTATCTTCACAATGAACCAAATGTTATAATTCATCGAGACCTTAAGCCAAGGAATGTTCTTTTAGTCAACTCTAGTGCAGAGCATTTAAAAGTCGGAGATTTTGGACTGAGCAAGCTTATCAAGGTCCAGAGTTCTCGTGATGTTTACAAGATGACTGGTGAAACTGGAAGCTATCGCTATATGGCTCCTGAAGTATTCAAACACCGGAAATACGATAAGAAGGTTGATGTGTTCTCCTTTGCGATGATTCTGTACGAGATGCTTGAAGGGGAACCACCTTTTGCAAATTATGAACCTTACGATGGAGCCAAATACGTGGCAGAAGGACACAGGCCAACAATGCGTGCAAAGAGTTATATACCTGAACTGCGAGAGTTGACAGAGCAGTGTTGGGCAGCTGATTATAATCAAAGACCTTCCTTCTTGGAGATCCTCAAACGGCTTGAGAAGATTAAGGAACAAAATCTACCTTCAGATAATCATTGGAAATTGTTCTCTTCATAA 1305 0.4567 MSSDTSTGGGSSGSSSSASDRGKKKEKVRVSRTSMILWHSHQNDAASVRKLLEEDRSLVTARDYDNRTPLHVASLHGWIDVAQCLIEFGADVNAQDRWKNTPLADAEGAKKYSMMELLKSYGGLSYGQSGSHFEQRAVAPPLPNKCDWEVDPSELDFSHSTRIGKGSFGEILKAHWRGTPVAVKRILPSLSDDKLVIQDFRHEVNLLVKLRHPNVVQFLGAVTDKKPLMLITEYLRGGDLHQYLKEKGSISPSTAVSFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSAEHLKVGDFGLSKLIKVQSSRDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPFANYEPYDGAKYVAEGHRPTMRAKSYIPELRELTEQCWAADYNQRPSFLEILKRLEKIKEQNLPSDNHWKLFSS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1422 434 PRINTS Tyrosine kinase catalytic domain signature 386 408 IPR001245 GO:0004672|GO:0006468
Dere13g1422 434 PRINTS Tyrosine kinase catalytic domain signature 270 288 IPR001245 GO:0004672|GO:0006468
Dere13g1422 434 PRINTS Tyrosine kinase catalytic domain signature 232 245 IPR001245 GO:0004672|GO:0006468
Dere13g1422 434 Pfam Protein tyrosine and serine/threonine kinase 160 415 IPR001245 GO:0004672|GO:0006468
Dere13g1422 434 MobiDBLite consensus disorder prediction 1 18 - -
Dere13g1422 434 FunFam serine/threonine-protein kinase STY46-like 150 236 - -
Dere13g1422 434 Gene3D - 8 129 IPR036770 -
Dere13g1422 434 SUPERFAMILY Protein kinase-like (PK-like) 156 420 IPR011009 -
Dere13g1422 434 ProSitePatterns Protein kinases ATP-binding region signature. 163 184 IPR017441 GO:0005524
Dere13g1422 434 Pfam Ankyrin repeats (many copies) 66 103 IPR002110 GO:0005515
Dere13g1422 434 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 62 420 - -
Dere13g1422 434 FunFam Integrin-linked protein kinase family 236 432 - -
Dere13g1422 434 ProSiteProfiles Protein kinase domain profile. 157 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1422 434 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Dere13g1422 434 CDD STKc_MAP3K-like 163 415 - -
Dere13g1422 434 Gene3D Transferase(Phosphotransferase) domain 1 237 431 - -
Dere13g1422 434 SMART serkin_6 157 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1422 434 PIRSF ILK 1 434 - -
Dere13g1422 434 SUPERFAMILY Ankyrin repeat 36 122 IPR036770 -
Dere13g1422 434 MobiDBLite consensus disorder prediction 1 27 - -
Dere13g1422 434 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Dere13g1422 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Dere13g1422 434 SMART ANK_2a 65 94 IPR002110 GO:0005515
Dere13g1422 434 Gene3D Phosphorylase Kinase; domain 1 149 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1422 Dere-ChrDere13 19370815 19377891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1422 1 434 MAP Kinase Kinase Kinase AT1G14000 79.271 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Dere13g1422 PK_Tyr_Ser-Thr 5.1e-65 CL0016