Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1412 ATGGCTGAACTCCCTCCTGGCTTTAGGTTTCACCCAACTGATGAGGAGCTGATTGTGTATTACCTTTGTAACCAATACATATCAAAGCCAAGCCCTGCCTCCATCATCCCAGAAGTTCATATCTATAAATTTGATCCATGGGAATTGCCTGAAAAAGCAGAGTTTGGAGAGAATGAATGGTATTTCTTTAGCCCAAGAGACAGGAAGTACCCAAATGGAGTGAGACCTAACAGGGCCACTGTGTCTGGGTACTGGAAGGCCACTGGGACAGACAAGGCAATCTATAGTGGGTCTAAGCATATTGGGGTGAAGAAAGCTCTGGTTTTTTACAGGGGAAAGCCACCAAAGGGTGTCAAGACAGATTGGATCATGCATGAGTATCGACTTGTTGAATCAAGAACACAAGACAACAGGAAAATTGGGTCCATGAGATTGGATGACTGGGTTCTGTGTAGGATCTATAAGAAGAAAAACATGGGAAAGACAATGGAGGAAAAAGAGGAACATCCCACTGCCCAAGTTAATGCAACAGCAGGAAGTTATGAGAGTGAGCAAGAAATGATGAAACTTCTTCCAAGGACTTTTTCCCTTGCTCATCTTTTGGATATGGACTATCTGGGTCCAATGTCCCAGATGCTTTCTGATGGGTGCTATAATTCAACCTTTGATCTTCAAAATAACACTTCCAATTCTGGAACAGACTCATTTGTGAAACCTCAAATGGTTGAATTGCCTGACCATTATGCAGAAGATTCAGGGAAGTTCCAAGTGATGAAACAGAGTAGCAGCATCAATAAGCAGCCAATCTTCGTAAACCAAGTGTATGATCTGTGA 834 0.4269 MAELPPGFRFHPTDEELIVYYLCNQYISKPSPASIIPEVHIYKFDPWELPEKAEFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHIGVKKALVFYRGKPPKGVKTDWIMHEYRLVESRTQDNRKIGSMRLDDWVLCRIYKKKNMGKTMEEKEEHPTAQVNATAGSYESEQEMMKLLPRTFSLAHLLDMDYLGPMSQMLSDGCYNSTFDLQNNTSNSGTDSFVKPQMVELPDHYAEDSGKFQVMKQSSSINKQPIFVNQVYDL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1412 277 Gene3D NAC domain 13 161 IPR036093 GO:0003677|GO:0006355
Dere13g1412 277 Pfam No apical meristem (NAM) protein 5 129 IPR003441 GO:0003677|GO:0006355
Dere13g1412 277 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 226 - -
Dere13g1412 277 ProSiteProfiles NAC domain profile. 4 156 IPR003441 GO:0003677|GO:0006355
Dere13g1412 277 FunFam NAC transcription factor 13 160 - -
Dere13g1412 277 SUPERFAMILY NAC domain 2 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1412 Dere-ChrDere13 19159400 19160467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1412 2 212 NAC Transcription Factor Family AT1G69490 67.117 1.80e-109 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere13g1412 NAM 1e-38 No_clan