Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1403 ATGAGAATCGAACTCTCTCCTCGAACCATCGTCTCTCATTTGTTCCCAAAACCCTTTCAAAACCCTGGCTCGAATCATCGCATAACATCCTTCTTTACTTCCCTCAATGGCTCTCAACTCTTCAGACCTGTCAGCCAATTATCCCACCAACCAAAAACCCCTGCTCTTTCACCTTCTCCCTCCGACCCTGGTCTCCTTTTCCGGGAAAAAATTCTCTACCTCGAGAAACTCAAAGTCAACTCCAGCAAAGCCCTCCGGGTAAATCCCAACTTCCGATCGGTTCCGCTGTCCTCTCTCAAGTCTGTAGAGGACTGCCTCTCCTCAATGGGCATCGAGCGCTCTGCAATGGGTCGAATCCTGGACATGTACCCCCAGCTTCTCACGTGCGACCCCTATTCCGATCTCTACCCTATTTTCGATTTCTTATTGAATGAGGTTGCAATTCCGTTCCCTGATATTCGGAAGTCGATCATACGGTGCCCGAGGCTATTGGTTTGCAGCGTGGATGAGCGACTCAGACCGGCGTTGAGCTTCTTGAGGAATTTAGGGTTTGTGGGACCCAATTCCATCAATTATCAGACCTCATTGCTGTTGGTGTCAAATGTGGAGAGTACCCTTATTCCCAAAATTGAGTATTTACTGAGTCTGGGGTTAGCTTACGAGGAAGTGGTAAATATGGTTATAAGGTCTCCCGGGTTACTGACGTTTAGTATTAGGAACAATTTTATGCCAAAGGTTGAGTATTTTTTGAAGGAGATGAATGGGGACATAGCTGAATTGAAGAGGTTTCCACAGTACTTTTCATTTAGTTTGGAGAGGAAGATTAAGCCTAGGCATAGGCTATTACTTGACCACGGGTTTTCACTTCCTTTGGGCGAGATGTTGAAGGTTAGTGATGGCGAGTTCAGTGCTAGGTTAATTGAAATGCGACTACAGTCACTTGATGGAAGGTAG 954 0.4633 MRIELSPRTIVSHLFPKPFQNPGSNHRITSFFTSLNGSQLFRPVSQLSHQPKTPALSPSPSDPGLLFREKILYLEKLKVNSSKALRVNPNFRSVPLSSLKSVEDCLSSMGIERSAMGRILDMYPQLLTCDPYSDLYPIFDFLLNEVAIPFPDIRKSIIRCPRLLVCSVDERLRPALSFLRNLGFVGPNSINYQTSLLLVSNVESTLIPKIEYLLSLGLAYEEVVNMVIRSPGLLTFSIRNNFMPKVEYFLKEMNGDIAELKRFPQYFSFSLERKIKPRHRLLLDHGFSLPLGEMLKVSDGEFSARLIEMRLQSLDGR 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1403 317 Gene3D Transcription termination factor 3, mitochondrial 66 315 IPR038538 -
Dere13g1403 317 SMART mt_12 154 185 IPR003690 GO:0003690|GO:0006355
Dere13g1403 317 SMART mt_12 117 149 IPR003690 GO:0003690|GO:0006355
Dere13g1403 317 SMART mt_12 188 219 IPR003690 GO:0003690|GO:0006355
Dere13g1403 317 SMART mt_12 224 256 IPR003690 GO:0003690|GO:0006355
Dere13g1403 317 SMART mt_12 82 112 IPR003690 GO:0003690|GO:0006355
Dere13g1403 317 SMART mt_12 257 288 IPR003690 GO:0003690|GO:0006355
Dere13g1403 317 PANTHER CGI-12 PROTEIN-RELATED 81 219 IPR003690 GO:0003690|GO:0006355
Dere13g1403 317 Pfam mTERF 105 182 IPR003690 GO:0003690|GO:0006355
Dere13g1403 317 Pfam mTERF 152 302 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1403 Dere-ChrDere13 19089634 19090587 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere13g1403 mTERF 4e-28 No_clan