Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1394 ATGCGACGATTGAATGCCCGCACTCGGGTCAATTCCAAATCTAAACACATGGATCCGATTAAGCTTCATCTTCGCTCCAACGCTCGCTCAGGTCTCTTTGCGCGCAATCCCAAGAGTTTTAACAGGTTCAACTGCTTTGTTTTCGCTTCCATTCTGATGGCCCTTGCTTTTCTCACCTGTTATGCATTCGTCTCCGGGAAGAGTTCACCCAATTCCGTAAAAACAAAATTTGCGATCGTTATTGATGGAGGGAGCACCGGGACCAGAATTCACGTCTTCAAGTACAGGTTGGAAGGTGGAAATGCGGTTTTTGATTTTGGGAAGGATGGTTTGGCTTCGATGAGATTGAACCCGGGTCTTTCGTCATTTGCGGGGGTGCCAGATGCGGCTGGCCACTCGCTTTTGGAGCTTCTGGATTTTGGAAAGAGTAAAATTCCGAAGGAGATTTGGAAAGATACGGAAATTCGACTAATGGCGACAGCTGGGCTGAGGATGCTGGAAGTAGATATGCAGCATCGGATACTGGCATCATGTAGGGGAGTGCTCCGTTCATCTGGATTTAAGTTTAGGGACGAATGGGCTTCTGTCATTACAGGTGCTGATGAAGGAGTATATGCTTGGATTGTTGCAAATTATGCACTTGGTACTCTTGGAGGTGATCCTTTGCATACAACAGGGATTATTGAACTTGGTGGGGCTTCTGCTCAGGTGACCTTTGTATCAGCTGAGTCAATTCCATCTGGGTTCATACGTGCTGTTAGACTTGGGAATACCACTTACAATCTTTACAGCAACAGCTTTCTTCATTTTGGCCTGAATGCTGCTCATGACTCATTGAGGGAAGCACTTATATCAGGAGATCTTAACTTGGCTACTCAATCTCTTCAGAAGGGGTTGCCTTTAGATCCATGTGCTCCCAAAGGCTATTCTCACAATGTTGAGTCAATGAATCTCTCTCCTGGTTCAATGAAGGAAGAAAACCGATATCGTTCTACTCTTCAAAGCAGGGGAAACTTTTCGGAGTGCAGATCTGCAGCATTGATGCTATTACAGAAAGGGAAAGAAAATTGTTCCTATCACCATTGTGACATGGGATCAACTTTCATACCTAGGCTTCAAGGGAATTTTCTTGCCACAGAAAATTTCTTCTACACATCAAAGTTTTTTGAATTAGGGCCAAGGCCGTTTCTGTCTGAGTTGATGACAGCTGGTGAAGAATTCTGTGGAGAGGATTGGTCAAAGCTGACAAAAAAGTACCAGTCCCTTGATGAGGAAGATTTGCTTCGGTATTGCTTCTCTTCAGCATACACAGTTGCTTTGCTTCACGACAGTCTTGGAATTGCTTTGAATGATGGGAGGGTTAAAGTTGCTAATCAGGTGGGAAGTATTCCACTTGATTGGGCTTTGGGAGCTTTTATCTTGCATAGCACAGCCGATTCAGGTGTAGAGAACCATGATTGGATTGCTGCTATAAGTGATGGATCACCGACACTCCTCTCACTTACTGCGATTTTTGTAATATTGTTATTTACAGCATGGTCTATATCTAGGTGGAGGAAACCTCAGCTGAAAACAATCTATGATCTTGAAAAAGGACGGTATATAGTTACACGAGTTGGTAGATCTTGA 1629 0.4408 MRRLNARTRVNSKSKHMDPIKLHLRSNARSGLFARNPKSFNRFNCFVFASILMALAFLTCYAFVSGKSSPNSVKTKFAIVIDGGSTGTRIHVFKYRLEGGNAVFDFGKDGLASMRLNPGLSSFAGVPDAAGHSLLELLDFGKSKIPKEIWKDTEIRLMATAGLRMLEVDMQHRILASCRGVLRSSGFKFRDEWASVITGADEGVYAWIVANYALGTLGGDPLHTTGIIELGGASAQVTFVSAESIPSGFIRAVRLGNTTYNLYSNSFLHFGLNAAHDSLREALISGDLNLATQSLQKGLPLDPCAPKGYSHNVESMNLSPGSMKEENRYRSTLQSRGNFSECRSAALMLLQKGKENCSYHHCDMGSTFIPRLQGNFLATENFFYTSKFFELGPRPFLSELMTAGEEFCGEDWSKLTKKYQSLDEEDLLRYCFSSAYTVALLHDSLGIALNDGRVKVANQVGSIPLDWALGAFILHSTADSGVENHDWIAAISDGSPTLLSLTAIFVILLFTAWSISRWRKPQLKTIYDLEKGRYIVTRVGRS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1394 542 Gene3D - 76 473 - -
Dere13g1394 542 Gene3D Exopolyphosphatase. Domain 2 198 461 - -
Dere13g1394 542 Pfam GDA1/CD39 (nucleoside phosphatase) family 74 478 IPR000407 GO:0016787
Dere13g1394 542 CDD NBD_sugar-kinase_HSP70_actin 79 262 - -
Dere13g1394 542 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 47 478 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1394 Dere-ChrDere13 18977058 18981958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1394 75 476 Nodulin-like Gene Family AT4G19180 26.977 2.13e-36 142