Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1388 ATGGTGCAGCGTCTCACATATCGCAAGAGGCATAGCTATGCCACCAAATCCAACCAGCATAGGGTTGTCAAAACCCCTGGTGGGAAGCTCGTTTATCAGAGCACTAAGAAAAGGGCTAGCGGGCCCAAGTGCCCTGTTACTGGCAAGAGGATTCAGGGGATTCCACACTTGAGACCTGCTGAATACAAGAGATCCAGGTTACCTAGGAACCAGAGGACTGTGAACCGTGCATATGGTGGAGTTTTGTCTGGAGGTGCTGTCAGAGAAAGGATCATTCGAGCCTTCTTGGTTGAAGAGCAAAAGATTGTAAAAAAGGTGTTGAAGATTCAGAAGGCAAAGGAAAAGCAAGCCTTGAAGGGCTAA 363 0.4821 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNQRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQALKG 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1388 120 Pfam Ribosomal protein L34e 1 96 IPR008195 GO:0003735|GO:0005840|GO:0006412
Dere13g1388 120 Gene3D - 39 120 - -
Dere13g1388 120 PANTHER 60S RIBOSOMAL PROTEIN L34 1 116 IPR008195 GO:0003735|GO:0005840|GO:0006412
Dere13g1388 120 ProSitePatterns Ribosomal protein L34e signature. 15 28 IPR018065 -
Dere13g1388 120 Gene3D - 1 37 - -
Dere13g1388 120 PRINTS Ribosomal protein L34 signature 13 26 IPR008195 GO:0003735|GO:0005840|GO:0006412
Dere13g1388 120 PRINTS Ribosomal protein L34 signature 26 43 IPR008195 GO:0003735|GO:0005840|GO:0006412
Dere13g1388 120 PRINTS Ribosomal protein L34 signature 44 54 IPR008195 GO:0003735|GO:0005840|GO:0006412
Dere13g1388 120 PRINTS Ribosomal protein L34 signature 66 88 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1388 Dere-ChrDere13 18930545 18932133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1388 1 120 Cytoplasmic Ribosomal Protein Gene Family AT3G28900 88.333 3.51e-74 214