Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1306 ATGCCTTCTGCCTCACTTTCTTCCTCAACCTCACCTTTTCCTATTATCACTCTCTGCTTCGTACTCTGCCTCTTTGTAGAGTTAGCAGCAACTCACACATGTTCTTCAAACCCCCACACATCTGCATCTTCATTGCTTTGCCCACCCTTCACTTCAAGTCCGCCATTTCCATTTTCTTTCTTACCTGGATGTGGCCATCCTTACTTCCAGATAAAGTGCTCTACTCCTTCTTCCATCATCTCCATTAACAACTTATCTTTCTCTATTCTTCGTTACAACCCCAATTCCTCTTCGCTTGTTCTATCTCCTCGTCTTAATAATGAATCAGAAGCAACAAACTCACTCGCCCACCAGAATTGCTCCTCTCCTCACTTCCTTTCTATTCCCAATCGTTCTATTAATCTCACTGGCTCGCCTTTCAGAGTCTCAGATGTTTCCTGTTCTCGCCTTTCTTTTCTTCAACCTTGCTCGCCTCCCACTCTGCCAAACTGTAGCCATTGTCCATGGGAATGCAAGCTTATCAAGAACCCAGCTTACCTTCTCAATGACTGTGGATCTGAGCATCATTCCGTTTCAGACACAGAGCGTCGCTGCGAAAGGGACGTTTTGGGGTATCTCGATTACATGTTAGCTTTGGGTATCGAGGTCGAGTGGGATGAATCCCAAGATCCTTACTTTTCAAGCTGCAGGGACTGCCGCGCAAAGAATGGAGTTTGTGGGTTCAATTCATCAGACCCAAAGAACCAATTCATCTGCTTTTACTCCAAATCTAGCTATTCACCTGCTTGGATTCGAAGGGTGAATCCCAATCGGATCGCTATTTTGTCCCTTGTAATCGCTTTAATGTCGTTGCTTGTCTTAGTTTCCGTCGCTACCGCCATTTTCCGCTCGAAGCGATTCAAATCATCCGGTACGGAGGAAGACCCAACAATTCTTTTCCTTCACAACCAGCGGTCTGCTAGTCTTCTTCCACCTGTCTTCACCTACGAGGAATTGGAGTCTTCCACTAATCGGTTTGACCCGAAACGGAAAATCGGCGATGGCGGGTTCGGGTCGGTGTTCGTGGGTCAACTCCACGATGGCAGAATCGTCGCAGTGAAGTACCTCCATAAGCACCACGCAGAGGCCGCCGCGGGACGAGCTTTCTCCACCAAGTCTTTCTGCAACGAAATTTTGATTCTTTCTTCCATTGACCATCCTAATCTCGTCAAGCTTCATGGGTATTGCAGCGACCCGAGAGGGCTGCTTCTGGTCTACGACTATGTCCCTAATGGAACTCTCGCAGATCATCTTCATGGCCCCAAGAGTATATACCGGAAAGGGTCTCTTACGTGGCTAGTGAGGCTTGATATTGCTCTGCAAACAGCATTAGCCATGGAGTACCTTCACTTCTCTGTTGTGCCACCGATAGTTCACAGAGACATCACTTCGTCCAACATCTTCGTGGACAAAGACATGAGGATTAAAGTTGGAGACTTTGGGCTGTCAAGGCTGTTGGTTTTGCAGGATACGTCGGCTTCAACCGGGTATGTCTGGACAGGGCCCCAAGGTACACCCGGGTATTTGGATCCGGATTACCACCGGTCATTCCGGTTAACGGAGAAAAGCGACGTGTATAGCTTCGGAGTGGTGTTGTTGGAGCTGATTTCCGGGTTGAAGGCGGTGGATCAGACCAGGGACAAGCGGGAAATCGCGTTGGCGGATCTGGTGGTGGCCAGAATCCATATGGGTCAGCTGAAGCAGGTGGTGGACCCGGTTCTGGCGTTGGAGGAGGAGGCGGTGGACGCCGTCGCAGCAGTGGCGGAACTGGCGTTCCGGTGCGTGGCGGCGGACAAGGACGACCGCCCGGATTCGAGAGAGGTGGTGGAGGAGCTGAAGCGCGTTCGGAGCCGATCCCGGGCGGAGCTCCGATCGTCGTCCAATTCGATCGCTGGAGCTGACGTGGCGAAGAACTGTGAAGTGAAGGATTGTGATTTGCGAGAATTCGATGGGGTCCAAAATGCACATGTGGTGTTTGACTAA 2022 0.503 MPSASLSSSTSPFPIITLCFVLCLFVELAATHTCSSNPHTSASSLLCPPFTSSPPFPFSFLPGCGHPYFQIKCSTPSSIISINNLSFSILRYNPNSSSLVLSPRLNNESEATNSLAHQNCSSPHFLSIPNRSINLTGSPFRVSDVSCSRLSFLQPCSPPTLPNCSHCPWECKLIKNPAYLLNDCGSEHHSVSDTERRCERDVLGYLDYMLALGIEVEWDESQDPYFSSCRDCRAKNGVCGFNSSDPKNQFICFYSKSSYSPAWIRRVNPNRIAILSLVIALMSLLVLVSVATAIFRSKRFKSSGTEEDPTILFLHNQRSASLLPPVFTYEELESSTNRFDPKRKIGDGGFGSVFVGQLHDGRIVAVKYLHKHHAEAAAGRAFSTKSFCNEILILSSIDHPNLVKLHGYCSDPRGLLLVYDYVPNGTLADHLHGPKSIYRKGSLTWLVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVDKDMRIKVGDFGLSRLLVLQDTSASTGYVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDQTRDKREIALADLVVARIHMGQLKQVVDPVLALEEEAVDAVAAVAELAFRCVAADKDDRPDSREVVEELKRVRSRSRAELRSSSNSIAGADVAKNCEVKDCDLREFDGVQNAHVVFD 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1306 673 Gene3D Transferase(Phosphotransferase) domain 1 422 652 - -
Dere13g1306 673 Pfam Wall-associated receptor kinase C-terminal 202 256 IPR032872 -
Dere13g1306 673 Pfam Protein kinase domain 341 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1306 673 ProSitePatterns Tyrosine protein kinases specific active-site signature. 470 482 IPR008266 GO:0004672|GO:0006468
Dere13g1306 673 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 635 IPR044652 GO:0004672
Dere13g1306 673 FunFam Putative serine/threonine-protein kinase At1g18390 family 315 421 - -
Dere13g1306 673 SUPERFAMILY Protein kinase-like (PK-like) 320 625 IPR011009 -
Dere13g1306 673 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Dere13g1306 673 ProSiteProfiles Protein kinase domain profile. 339 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1306 673 Gene3D Phosphorylase Kinase; domain 1 315 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1306 Dere-ChrDere13 17973433 17975454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1306 19 651 Receptor kinase-like Gene Family AT1G69910 64.055 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Dere13g1306 Pkinase 1.1e-41 CL0016