Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1302 ATGGCAAACACTAACCTGAAGCTTCTTGGTGGCTGGTTTAGTCCATTTTCCACGAGGGTTGAGATTGCCCTCAACATCAAATCCCTGAAATATGACTTCGTTGAAGAGAACTTGAATCCTAAAAGTCATCTTCTTCTTCAGTCAAATCCAGTGCACAAGAAAATCCCAGTTCTCCTCCATGGTGATAAACCCATCTGTGAATCTATTATCATCGTTGAATACATAGATGAGGTCTGGAACTCTGGTCCCTCCATCCTTCCTGTTAACGCTTACGATCGAGCTATGGCTCGTTTCTGGGTTGACTACATCGATAACACGTGGGTTGTGGCCATGACAAACATTCTACGCACCGACGGTGATGAAGCAAAGAAGCCATACTTGAAGGAATTGGAAGAGGATCTTGTGACAATGGAAGATCTGTTGGAGAAAAGCAGCAAAGGAAAGGCCTTTTTTGGAGGAGATCAGATTGGGTTGATTGATATTGCTTTTGGGAGCTTGCTGGGTTTGTTGAGTGTCATCGAGATTATGAGTGGATGGAAGCTGCTAGATGAAGCAAAGGCTCCTGCTTTGGTGAAATGGGCAAAGAGGTTCACTGCTGATCCTAACGTGAAGGGATTAATACCTGAAACTGAGAGGCTCATAGATTATGGCAAGACTCTTGAGAAAACTGGTGCCATTGCCAAGTAA 687 0.441 MANTNLKLLGGWFSPFSTRVEIALNIKSLKYDFVEENLNPKSHLLLQSNPVHKKIPVLLHGDKPICESIIIVEYIDEVWNSGPSILPVNAYDRAMARFWVDYIDNTWVVAMTNILRTDGDEAKKPYLKELEEDLVTMEDLLEKSSKGKAFFGGDQIGLIDIAFGSLLGLLSVIEIMSGWKLLDEAKAPALVKWAKRFTADPNVKGLIPETERLIDYGKTLEKTGAIAK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1302 228 Gene3D - 86 227 - -
Dere13g1302 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Dere13g1302 228 FunFam Glutathione S-transferase GSTU6 1 86 - -
Dere13g1302 228 FunFam Glutathione S-transferase U9 86 227 - -
Dere13g1302 228 Pfam Glutathione S-transferase, C-terminal domain 108 201 IPR004046 -
Dere13g1302 228 SUPERFAMILY GST C-terminal domain-like 85 219 IPR036282 -
Dere13g1302 228 CDD GST_C_Tau 90 220 IPR045074 GO:0004364|GO:0006749
Dere13g1302 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 212 IPR045073 -
Dere13g1302 228 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Dere13g1302 228 SFLD Main.3: Omega- and Tau-like 2 223 IPR045073 -
Dere13g1302 228 Coils Coil 127 147 - -
Dere13g1302 228 CDD GST_N_Tau 6 79 - -
Dere13g1302 228 Gene3D Glutaredoxin 1 85 - -
Dere13g1302 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 225 IPR010987 -
Dere13g1302 228 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Dere13g1302 228 SFLD Main (cytGST) 2 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1302 Dere-ChrDere13 17920711 17921479 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1302 1 220 Glutathione S-transferase Gene Family AT1G10370 54.299 5.21e-84 248