Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1300 ATGGCGGACAGTGGCCTGAAGCTTCTGGGTAGATGGTCAAGCCCTTATGCGATGAGGGTCAAGATTGCCCTTAACATCAAATCCCTTGAATATGAATACTTTGAAGAGACCATGAACCCCAAGAGCGATCTTCTTCTTCAGTCTAACCCCGTTTACGGCAAAATCCCAGTTCTTATCCACCATGGTAAACCCATCTGCGAATCTCTGATCATAGTCGAATACATTGACGAGGCTTGGTCCTCTGGTCCCTCCATCCTCCCCTCCGATGCTTATGATCGAGTAATCGCTCGGTTCTGGGCTGCTTACATTGACGACAAGTGGTTTCCGTCAATGAAAAGCATTATAACTGTTGAAGATGACGAGGCAAGGAAGCTATACTTTGAGACAATGGAAGAAGTGCTTGCAAGGGTGGAGGACGCGTTTGGGAAATGCAGCAAAGGAAAACCCTTTTTCGGTGGCGATCGGATTGGATTCCTTGATATTGCTTTTGGCAGCAACCTGGGTTGGCTCAGCGTTATAGAAAATTTGTATGGACGGAAGCTGCTTATTGAAGCAAAGGCTCCTGATCTGGTGAAATGGGCTGAAAGATTTGCTGCTGATCCTGCTGTGAAGGGTCTCATACCTGAAACTGATAAACTGATAGAGCTTTCCAAGTCCCTTCAGATCAAATGGAGAGCTGCAATTGCGAAGAAGTAG 696 0.4655 MADSGLKLLGRWSSPYAMRVKIALNIKSLEYEYFEETMNPKSDLLLQSNPVYGKIPVLIHHGKPICESLIIVEYIDEAWSSGPSILPSDAYDRVIARFWAAYIDDKWFPSMKSIITVEDDEARKLYFETMEEVLARVEDAFGKCSKGKPFFGGDRIGFLDIAFGSNLGWLSVIENLYGRKLLIEAKAPDLVKWAERFAADPAVKGLIPETDKLIELSKSLQIKWRAAIAKK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1300 231 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Dere13g1300 231 FunFam Glutathione S-transferase GSTU6 1 86 - -
Dere13g1300 231 CDD GST_C_Tau 90 218 IPR045074 GO:0004364|GO:0006749
Dere13g1300 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 226 IPR010987 -
Dere13g1300 231 FunFam Glutathione S-transferase U9 86 227 - -
Dere13g1300 231 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Dere13g1300 231 Gene3D - 86 228 - -
Dere13g1300 231 Pfam Glutathione S-transferase, C-terminal domain 127 196 - -
Dere13g1300 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 214 IPR045073 -
Dere13g1300 231 CDD GST_N_Tau 6 79 - -
Dere13g1300 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Dere13g1300 231 SFLD Main.3: Omega- and Tau-like 3 226 IPR045073 -
Dere13g1300 231 SFLD Glutathione Transferase (cytosolic) 3 226 IPR040079 -
Dere13g1300 231 SUPERFAMILY GST C-terminal domain-like 85 218 IPR036282 -
Dere13g1300 231 Gene3D Glutaredoxin 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1300 Dere-ChrDere13 17911261 17912228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1300 1 226 Glutathione S-transferase Gene Family AT1G10360 58.590 1.16e-91 267